Gene
zbedx
- ID
- ZDB-GENE-030131-2597
- Name
- zinc finger BED-type containing X
- Symbol
- zbedx Nomenclature History
- Previous Names
-
- fc12g06
- wu:fb98h02
- wu:fc12g06
- zgc:161969 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to enable DNA binding activity and metal ion binding activity. Is expressed in telencephalon.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Diotel et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| la029187Tg | Transgenic insertion | Unknown | Unknown | DNA | |
| sa33835 | Allele with one point mutation | Unknown | Splice Site | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Ribonuclease H-like superfamily | Zinc finger, BED-type | Zinc finger C2H2 superfamily |
|---|---|---|---|---|---|
| UniProtKB:A4IFY5 | InterPro | 630 | |||
| UniProtKB:F1RBD5 | InterPro | 717 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:161969-201
(1)
|
Ensembl | 2,501 nt | ||
| mRNA |
zgc:161969-202
(1)
|
Ensembl | 2,745 nt |
1 - 2 of 2
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-193C12 | ZFIN Curated Data | |
| Contained in | BAC | CH211-194E2 | ZFIN Curated Data | |
| Contains | SNP | rs3727955 | ZFIN Curated Data | |
| Encodes | EST | fb98h02 | ||
| Encodes | EST | fc12g06 | ||
| Encodes | cDNA | MGC:161969 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001083849 (1) | 2528 nt | ||
| Genomic | GenBank:CR854926 (1) | 110984 nt | ||
| Polypeptide | UniProtKB:F1RBD5 (1) | 717 aa |
No data available