Gene

arvcfb

ID
ZDB-GENE-060526-60
Name
ARVCF delta catenin family member b
Symbol
arvcfb Nomenclature History
Previous Names
  • si:ch211-173n20.1 (1)
  • wu:fc11a08
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have cadherin binding activity. Predicted to be involved in cell-cell adhesion and cell-cell junction assembly. Predicted to localize to several cellular components, including adherens junction; nucleus; and plasma membrane. Human ortholog(s) of this gene implicated in DiGeorge syndrome. Orthologous to human ARVCF (ARVCF delta catenin family member).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Hsu et al., 2012
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With arvcfb Human Ortholog
No data available
Associated With arvcfb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR028435 Plakophilin/Delta catenin
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR016024 Armadillo-type fold
Repeat IPR000225 Armadillo
Domain Details Per Protein
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA arvcfb-201 (1) Ensembl 2,961 nt
mRNA arvcfb-202 (1) Ensembl 575 nt
mRNA arvcfb-203 (1) Ensembl 679 nt
mRNA arvcfb-204 (1) Ensembl 9,165 nt
mRNA arvcfb-206 (1) Ensembl 774 nt
mRNA arvcfb-207 (1) Ensembl 763 nt
mRNA arvcfb-208 (1) Ensembl 2,915 nt
mRNA arvcfb-209 (1) Ensembl 2,808 nt
ncRNA arvcfb-003 (1) Ensembl 610 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations