ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-33c12.4
- ID
- ZDB-GENE-030131-2527
- Name
- si:dkey-33c12.4
- Symbol
- si:dkey-33c12.4 Nomenclature History
- Previous Names
-
- fc10f01
- si:ch211-243o19.6 (1)
- wu:fc10f01
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Orthologous to human TTC31 (tetratricopeptide repeat domain 31).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR000571 | Zinc finger, CCCH-type |
| Homologous_superfamily | IPR009060 | UBA-like superfamily |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
| Repeat | IPR019734 | Tetratricopeptide repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat | UBA-like superfamily | Zinc finger, CCCH-type |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:B8A599 | InterPro | 631 | |||||||
| UniProtKB:A0A8M9QFE8 | InterPro | 648 | |||||||
| UniProtKB:A0AC58H152 | InterPro | 648 | |||||||
| UniProtKB:A0AC58H164 | InterPro | 609 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-33c12.4-201
(1)
|
Ensembl | 2,764 nt | ||
| mRNA |
si:dkey-33c12.4-205
(1)
|
Ensembl | 524 nt | ||
| ncRNA |
si:dkey-33c12.4-002
(1)
|
Ensembl | 523 nt | ||
| ncRNA |
si:dkey-33c12.4-006
(1)
|
Ensembl | 422 nt | ||
| ncRNA |
si:dkey-33c12.4-202
(1)
|
Ensembl | 367 nt | ||
| ncRNA |
si:dkey-33c12.4-204
(1)
|
Ensembl | 640 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance