ZFIN is now using GRCz12tu for Genomic Data
Gene
slc35h1
- ID
- ZDB-GENE-030131-2202
- Name
- solute carrier family 35 member H1
- Symbol
- slc35h1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be located in membrane. Predicted to be active in extracellular matrix. Is expressed in neuromast. Orthologous to human SLC35H1 (solute carrier family 35 member H1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55285 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002035 | von Willebrand factor, type A |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR004853 | Sugar phosphate transporter domain |
| Domain | IPR048287 | Thrombospondin-like, N-terminal domain |
| Family | IPR050186 | Triose Phosphate/Phosphate Translocator |
| Family | IPR050991 | Extracellular Matrix Regulatory Proteins |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036465 | von Willebrand factor A-like domain superfamily |
| Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Collagen triple helix repeat | Concanavalin A-like lectin/glucanase domain superfamily | Extracellular Matrix Regulatory Proteins | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin-like fold | Sugar phosphate transporter domain | Thrombospondin-like, N-terminal domain | Triose Phosphate/Phosphate Translocator | von Willebrand factor A-like domain superfamily | von Willebrand factor, type A |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1R7R7 | InterPro | 362 | |||||||||||
| UniProtKB:Q7ZW48 | InterPro | 362 | |||||||||||
| UniProtKB:A0A8M9PQK5 | InterPro | 1587 | |||||||||||
| UniProtKB:A0A8M9PWU0 | InterPro | 1586 | |||||||||||
| UniProtKB:A0AC58IIW2 | InterPro | 1896 | |||||||||||
| UniProtKB:A0AC58IIW3 | InterPro | 1896 | |||||||||||
| UniProtKB:A0AC58IIW6 | InterPro | 362 | |||||||||||
| UniProtKB:A0AC58IIW7 | InterPro | 362 | |||||||||||
| UniProtKB:A0AC58IIW9 | InterPro | 1566 | |||||||||||
| UniProtKB:A0AC58IIX0 | InterPro | 1897 | |||||||||||
| UniProtKB:A0AC58IIX1 | InterPro | 362 | |||||||||||
| UniProtKB:A0AC58IIX5 | InterPro | 1896 | |||||||||||
| UniProtKB:A0AC58IIZ3 | InterPro | 1897 | |||||||||||
| UniProtKB:A0AC58IIZ9 | InterPro | 1897 | |||||||||||
| UniProtKB:A0AC58IJ01 | InterPro | 1897 | |||||||||||
| UniProtKB:A0AC58IJ08 | InterPro | 1897 | |||||||||||
| UniProtKB:A0AB32TQP1 | InterPro | 1567 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc35c2-201
(1)
|
Ensembl | 7,336 nt | ||
| mRNA |
slc35c2-202
(1)
|
Ensembl | 2,298 nt | ||
| mRNA |
slc35c2-203
(1)
|
Ensembl | 7,430 nt | ||
| mRNA |
slc35c2-205
(1)
|
Ensembl | 838 nt | ||
| mRNA |
slc35c2-206
(1)
|
Ensembl | 5,553 nt | ||
| ncRNA |
slc35c2-004
(1)
|
Ensembl | 714 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers