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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-2193
Gene Name: PR domain containing 1a, with ZNF domain
Gene Symbol: prdm1a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: nrd (1), prdm1, Blimp-1 (1), Blimp1 (1), narrowminded (1), U boot, u-boot (1), ubo, wu:fb99c12, zgc:91885

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding transcription factor activity. Involved in several processes, including embryonic pectoral fin morphogenesis; positive regulation of cell differentiation; and skeletal system  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
m805 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • nl3 Point Mutation Unknown Unknown ENU
    prdm1a_unspecified Unspecified Unknown Unknown
    sa6407 Point Mutation Unknown Premature Stop ENU
    sa9796 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22750 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tp39 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH prdm1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH prdm1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of transcription by RNA polymerase II (more)
    Cellular Component cytoplasm (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 27)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prdm1a-201 (1) 3694
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM prdm1a
    MARKER RELATIONSHIPS
    prdm1a Contained in: [BAC] DKEY-11F5 (order this)
    prdm1a Encodes: [EST] fb99c12, IMAGE:7136589 (1) (order this)
    [cDNA] MGC:91885 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199515 (1) 3700 bp
    Genomic GenBank:AL928573 (1) 244471 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5MB23 (1) 776 aa
    Sequence Clusters UniGene:77773 (1)
    Sequence Information (all 22)
    ORTHOLOGY for prdm1a ( Chr: 16 )
    CITATIONS (111)