Gene

prdm1a

ID

ZDB-GENE-030131-2193

Name

PR domain containing 1a, with ZNF domain

Symbol

prdm1a Nomenclature History

Previous Names

nrd (1)
prdm1
Blimp-1 (1)
Blimp1 (1)
narrowminded (1)
U boot
u-boot (1)
ubo
wu:fb99c12
zgc:91885

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Exhibits DNA-binding transcription factor activity. Involved in several processes, including embryonic pectoral fin morphogenesis; positive regulation of cell differentiation; and skeletal system morphogenesis. Predicted to localize to cytoplasm and nucleus. Is expressed in several structures, including digestive system; ectoderm; fin bud; mesoderm; and nervous system. Orthologous to human PRDM1 (PR/SET domain 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

57 figures from 31 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7136589 (15 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 38 figures from 19 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With prdm1a Human Ortholog

No data available

Associated With prdm1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001214	SET domain
Domain	IPR013087	Zinc finger C2H2-type
Domain	IPR044413	PRDM1, PR/SET domain
Family	IPR016608	PR domain zinc finger protein 1
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily