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Gene

prdm1a

ID
ZDB-GENE-030131-2193
Name
PR domain containing 1a, with ZNF domain
Symbol
prdm1a Nomenclature History
Previous Names
  • nrd (1)
  • prdm1
  • Blimp-1 (1)
  • Blimp1 (1)
  • narrowminded (1)
  • U boot
  • u-boot (1)
  • ubo
  • wu:fb99c12
  • zgc:91885
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Enables DNA-binding transcription factor activity. Acts upstream of or within several processes, including negative regulation of macromolecule metabolic process; positive regulation of cell differentiation; and skeletal system morphogenesis. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including digestive system; ectoderm; fin bud; mesoderm; and nervous system. Orthologous to human PRDM1 (PR/SET domain 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
56 figures from 30 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
37 figures from 18 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prdm1a Human Ortholog
No data available
Associated With prdm1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR013087 Zinc finger C2H2-type
Family IPR016608 PR domain zinc finger protein 1
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Domain Details Per Protein
Protein Length PR domain zinc finger protein 1 SET domain Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:Q68EH4 776
UniProtKB:Q6RI23 776
UniProtKB:Q5MB23 776
UniProtKB:A5XCE6 137
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations