Gene

col14a1b

ID

ZDB-GENE-030131-1985

Name

collagen, type XIV, alpha 1b

Symbol

col14a1b Nomenclature History

Previous Names

si:zfos-632h11.7
wu:fb93g03

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in interstitial matrix. Is expressed in trunk. Human ortholog(s) of this gene implicated in esophagus squamous cell carcinoma. Orthologous to human COL14A1 (collagen type XIV alpha 1 chain).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With col14a1b Human Ortholog

No data available

Associated With col14a1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002035	von Willebrand factor, type A
Domain	IPR003961	Fibronectin type III
Domain	IPR048287	Thrombospondin-like, N-terminal domain
Family	IPR050525	Extracellular Matrix Assembly and Organization
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036465	von Willebrand factor A-like domain superfamily
Repeat	IPR008160	Collagen triple helix repeat

Domain Details Per Protein

Protein	Length	Collagen triple helix repeat	Concanavalin A-like lectin/glucanase domain superfamily	Extracellular Matrix Assembly and Organization	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin-like fold	Thrombospondin-like, N-terminal domain	von Willebrand factor A-like domain superfamily	von Willebrand factor, type A
UniProtKB:A0A8M9PS14 InterPro	1676

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	col14a1b-201 (1) Ensembl	Ensembl	2,329 nt	Select Tool ZFIN BLAST
mRNA	col14a1b-202 (1) Ensembl	Ensembl	939 nt	Select Tool ZFIN BLAST
mRNA	col14a1b-203 (1) Ensembl	Ensembl	1,360 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations