ZFIN is now using GRCz12tu for Genomic Data
Gene
clcn3
- ID
- ZDB-GENE-030131-1699
- Name
- Cl-/H+ antiporter 3
- Symbol
- clcn3 Nomenclature History
- Previous Names
-
- fb78c02
- wu:fb78c02
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable voltage-gated chloride channel activity. Predicted to be involved in chloride transmembrane transport and proton transmembrane transport. Predicted to be located in early endosome membrane and late endosome membrane. Predicted to be active in several cellular components, including cytoplasmic vesicle; endoplasmic reticulum membrane; and lysosomal membrane. Is expressed in several structures, including eye; female organism; heart; liver; and pleuroperitoneal region. Orthologous to human CLCN3 (Cl-/H+ antiporter 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Thyme et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CBS domain | CBS domain superfamily | Chloride channel | Chloride channel, core | H(+)/Cl(-) exchange transporter 3 |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9Q891 | InterPro | 799 | |||||
| UniProtKB:A0A8M9Q239 | InterPro | 824 | |||||
| UniProtKB:A0A8M9PPD0 | InterPro | 824 | |||||
| UniProtKB:A0A8M9QHF3 | InterPro | 849 | |||||
| UniProtKB:A0A8M9Q887 | InterPro | 874 | |||||
| UniProtKB:A0AB32TNM4 | InterPro | 799 | |||||
| UniProtKB:A0AC58G317 | InterPro | 799 | |||||
| UniProtKB:A0AC58G319 | InterPro | 824 | |||||
| UniProtKB:A0AC58G325 | InterPro | 824 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers