ZFIN ID: ZDB-GENE-030131-1629
Gene Name: caldesmon 1a
Gene Symbol: cald1a
Sequence Ontology ID : SO:0000704

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Previous Names: cald1l, fb76e12, wu:fb76e12 (1), zgc:171553

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have actin binding activity, calmodulin binding activity, and myosin binding activity; involved in peristalsis; orthologous to human CALD1 (caldesmon 1).
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Larval:Day 6 (144.0h-168.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024732Tg Transgenic Insertion Unknown Unknown DNA
sa16974 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 4 from Abrams et al., 2012
    Observed in:
    DISEASE ASSOCIATED WITH cald1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cald1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peristalsis (more)
    Molecular Function actin binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006017 (1)
  • InterPro:IPR006018 (1)
  • Pfam:PF02029 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cald1a
    MARKER RELATIONSHIPS
    cald1aEncodes: [EST] fb76e12
    [cDNA] MGC:171553 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114883 (1) 1846bp
    Genomic GenBank:FO681357 (1) 116337bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QRU4 (1) 519aa
    Sequence Clusters UniGene:114623 (1)
    Sequence Information (all 20)
    OTHER cald1a GENE PAGES
  • Alliance (1)
  • Gene:322909 (1)
  • ORTHOLOGY for cald1a (Chr: 4)
    CITATIONS (22)