ZFIN is now using GRCz12tu for Genomic Data
Gene
otop1
- ID
- ZDB-GENE-030131-1613
- Name
- otopetrin 1
- Symbol
- otop1 Nomenclature History
- Previous Names
-
- backstroke
- bks
- wu:fb76b02 (1)
- zgc:103626
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables cholesterol binding activity and identical protein binding activity. Involved in proton transmembrane transport. Acts upstream of or within otolith formation and otolith mineralization. Is active in membrane. Is expressed in lateral line system; otic vesicle; vestibuloauditory system; and yolk syncytial layer. Orthologous to human OTOP1 (otopetrin 1).
- Genome Resources
-
- Alliance (1)
- Gene:322893 (1)
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:103626 (14 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR004878 | Otopetrin |
Domain Details Per Protein
| Protein | Additional Resources | Length | Otopetrin |
|---|---|---|---|
| UniProtKB:Q7ZWK8 | InterPro | 586 | |
| UniProtKB:A0AC58H5N3 | InterPro | 454 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance