ZFIN is now using GRCz12tu for Genomic Data

Gene

pde4dip

ID

ZDB-GENE-030131-1518

Name

phosphodiesterase 4D interacting protein

Symbol

pde4dip Nomenclature History

Previous Names

fb73f05
im:6912350
si:ch211-242b18.1 (1)
wu:fb73f05

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable molecular adaptor activity. Predicted to be involved in centrosome cycle and regulation of Golgi organization. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be active in Golgi apparatus and centrosome. Orthologous to human PDE4DIP (phosphodiesterase 4D interacting protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6912350 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Scott et al., 2021
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pde4dip Human Ortholog

No data available

Associated With pde4dip Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR040947	Short myomegalin-like EB1 binding protein, N-terminal
Domain	IPR056273	CDK5 regulatory subunit-associated protein 2/Myomegalin, coiled coil
Family	IPR052593	Microtubule-associated AKAP9-binding protein

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M3AWF1	InterPro	2104
UniProtKB:A0A8M3AL06	InterPro	2194
UniProtKB:A0A8M3ATD8	InterPro	2196
UniProtKB:A0A8M3B497	InterPro	2238
UniProtKB:A0A8M3AWE6	InterPro	2238
UniProtKB:A0A8M2B7N8	InterPro	2176
UniProtKB:A0A8M2B7Y4	InterPro	2128
UniProtKB:A0A8M9PC95	InterPro	2195
UniProtKB:A0A8M3ALQ0	InterPro	2087
UniProtKB:A0A8M3ALP5	InterPro	2238
UniProtKB:A0A8M2B7P4	InterPro	2239
UniProtKB:A0A8M3B4A2	InterPro	2125
UniProtKB:A0A8M9PHV9	InterPro	2179
UniProtKB:A0AB32T789	InterPro	2244
UniProtKB:A0AB32T799	InterPro	2244
UniProtKB:A0AB32T8K4	InterPro	2201
UniProtKB:A0AB32T902	InterPro	2200
UniProtKB:A0AB32T9R2	InterPro	2175
UniProtKB:A0AB32TA32	InterPro	2244
UniProtKB:A0AB32TAV7	InterPro	2110
UniProtKB:A0AB32TB54	InterPro	2093
UniProtKB:A0AB32TCT4	InterPro	2202
UniProtKB:A0AB32TEA5	InterPro	2245
UniProtKB:A0AB32TEN6	InterPro	2131
UniProtKB:A0AC58I5Q0	InterPro	2237
UniProtKB:A0AC58I5Q1	InterPro	2237
UniProtKB:A0AC58I5Q2	InterPro	2237
UniProtKB:A0AC58I5Q3	InterPro	2238
UniProtKB:A0AC58I5Q5	InterPro	2194
UniProtKB:A0AC58I5Q8	InterPro	2238
UniProtKB:A0AC58I5Q9	InterPro	2193
UniProtKB:A0AC58I5R2	InterPro	2195
UniProtKB:A0AC58I5R5	InterPro	2193
UniProtKB:A0AC58I5R6	InterPro	2236
UniProtKB:A0AC58I5R7	InterPro	2196
UniProtKB:A0AC58I5R8	InterPro	2195
UniProtKB:A0AC58I5R9	InterPro	2191
UniProtKB:A0AC58I5S1	InterPro	2194
UniProtKB:A0AC58I5S2	InterPro	2193
UniProtKB:A0AC58I5S3	InterPro	2192
UniProtKB:A0AC58I5S4	InterPro	2130
UniProtKB:A0AC58I5S5	InterPro	2192
UniProtKB:A0AC58I5S6	InterPro	2238
UniProtKB:A0AC58I5S7	InterPro	2129
UniProtKB:A0AC58I5S8	InterPro	2132
UniProtKB:A0AC58I5S9	InterPro	2193
UniProtKB:A0AC58I5T0	InterPro	2128
UniProtKB:A0AC58I5T1	InterPro	2174
UniProtKB:A0AC58I5T2	InterPro	2175
UniProtKB:A0AC58I5T3	InterPro	2194
UniProtKB:A0AC58I5T4	InterPro	2174
UniProtKB:A0AC58I5T5	InterPro	2129
UniProtKB:A0AC58I5T6	InterPro	2086
UniProtKB:A0AC58I5T8	InterPro	2086
UniProtKB:A0AC58I5T9	InterPro	2086
UniProtKB:A0AC58I5U0	InterPro	2192
UniProtKB:A0AC58I5U1	InterPro	2085
UniProtKB:A0AC58I5U2	InterPro	2087
UniProtKB:A0AC58I5U3	InterPro	2085
UniProtKB:A0AC58I5U4	InterPro	2044
UniProtKB:A0AC58I5U5	InterPro	2043
UniProtKB:A0AC58I5U6	InterPro	2085
UniProtKB:A0AC58I5U7	InterPro	2130
UniProtKB:A0AC58I5U8	InterPro	2084
UniProtKB:A0AC58I5U9	InterPro	2086
UniProtKB:A0AC58I5V0	InterPro	2086
UniProtKB:A0AC58I5V1	InterPro	2043
UniProtKB:A0AC58I5V2	InterPro	2042
UniProtKB:A0AC58I5V4	InterPro	2042
UniProtKB:A0AC58I5V5	InterPro	2087
UniProtKB:A0AC58I5V7	InterPro	2043
UniProtKB:A0AC58I5W3	InterPro	2085
UniProtKB:A0AC58I5X5	InterPro	2042

Transcripts

Genome Browsers

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-242b18.1-201 (1) Ensembl	Ensembl	3,000 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-202 (1) Ensembl	Ensembl	644 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-203 (1) Ensembl	Ensembl	8,929 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-204 (1) Ensembl	Ensembl	8,003 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-205 (1) Ensembl	Ensembl	836 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-207 (1) Ensembl	Ensembl	1,302 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-208 (1) Ensembl	Ensembl	465 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-209 (1) Ensembl	Ensembl	498 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-242b18.1-006 (1) Ensembl	Ensembl	750 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance

Citations