Gene

pde4dip

ID

ZDB-GENE-030131-1518

Name

phosphodiesterase 4D interacting protein

Symbol

pde4dip Nomenclature History

Previous Names

fb73f05
im:6912350
si:ch211-242b18.1 (1)
wu:fb73f05

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to enable molecular adaptor activity. Predicted to be involved in centrosome cycle; positive regulation of microtubule nucleation; and regulation of Golgi organization. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be active in Golgi apparatus and centrosome. Orthologous to human PDE4DIP (phosphodiesterase 4D interacting protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6912350 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Scott et al., 2021
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pde4dip Human Ortholog

No data available

Associated With pde4dip Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR012943	Centrosomin, N-terminal motif 1
Domain	IPR040947	Short myomegalin-like EB1 binding protein, N-terminal
Family	IPR052593	Microtubule-associated AKAP9-binding protein

Domain Details Per Protein

Protein	Length	Centrosomin, N-terminal motif 1	Microtubule-associated AKAP9-binding protein	Short myomegalin-like EB1 binding protein, N-terminal
UniProtKB:A0A8M3AWF1 InterPro	2104
UniProtKB:A0A8M3AL06 InterPro	2194
UniProtKB:A0A8M3ATD8 InterPro	2196
UniProtKB:A0A8M3B497 InterPro	2238
UniProtKB:A0A8M3AWE6 InterPro	2238
UniProtKB:A0A8M2B7N8 InterPro	2176
UniProtKB:A0A8M2B7Y4 InterPro	2128
UniProtKB:A0A8M9PC95 InterPro	2195
UniProtKB:A0A8M3ALQ0 InterPro	2087
UniProtKB:A0A8M3ALP5 InterPro	2238
UniProtKB:A0A8M2B7P4 InterPro	2239
UniProtKB:A0A8M3B4A2 InterPro	2125
UniProtKB:A0A8M9PHV9 InterPro	2179

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-242b18.1-201 (1) Ensembl	Ensembl	3,000 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-202 (1) Ensembl	Ensembl	644 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-203 (1) Ensembl	Ensembl	8,929 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-204 (1) Ensembl	Ensembl	8,003 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-205 (1) Ensembl	Ensembl	836 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-207 (1) Ensembl	Ensembl	1,302 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-208 (1) Ensembl	Ensembl	465 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-242b18.1-209 (1) Ensembl	Ensembl	498 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-242b18.1-006 (1) Ensembl	Ensembl	750 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations