Gene

apoc1

ID

ZDB-GENE-030131-1074

Name

apolipoprotein C-I

Symbol

apoc1 Nomenclature History

Previous Names

apoc1l
fb58g10
wu:fb58g10

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Involved in cell migration involved in gastrulation. Predicted to localize to extracellular region. Human ortholog(s) of this gene implicated in Alzheimer's disease and obesity. Is expressed in DEL; blastoderm; and liver. Orthologous to human APOC1 (apolipoprotein C1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from 4 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Wang et al., 2013
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With apoc1 Human Ortholog

No data available

Associated With apoc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR006781	Apolipoprotein C-I
Homologous_superfamily	IPR043081	Apolipoprotein C-I domain superfamily

Domain Details Per Protein

Protein	Length	Apolipoprotein C-I	Apolipoprotein C-I domain superfamily
UniProtKB:E9QFX0 InterPro	84
UniProtKB:E9QDI1 InterPro	85

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	apoc1-201 (1) Ensembl	Ensembl		777 nt	Select Tool
mRNA	apoc1-202 (1) Ensembl	Ensembl		783 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-apoc1	polyclonal	apoc1		Rabbit			1
Ab2-apoc1	polyclonal	apoc1		Rabbit			1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations