ZFIN ID: ZDB-GENE-021206-4
Gene Name: SEBOX homeobox
Gene Symbol: sebox
Sequence Ontology ID : SO:0000704

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Previous Names: mezzo (1), OG9 homeobox gene (1), og9x (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity; involved in endoderm development, heart morphogenesis, and regulation of transcription, DNA-templated; predicted to localize to the nucleus; orthologous to  ...
GENE EXPRESSION
All Expression Data: 16 figures from 12 publications
Wild-type Stages, Structures: Blastula:Sphere (4.0h-4.33h) to Gastrula:Shield (6.0h-8.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33769 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sebox HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sebox VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process endoderm development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sebox-201 (1) 4528
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sebox
    MARKER RELATIONSHIPS
    seboxContained in: [BAC] CH211-110P13 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173227 (1) 4075bp
    Genomic GenBank:BX957226 (1) 149414bp
    Select Tool
    Polypeptide UniProtKB:Z4YID0 (1) 313aa
    Sequence Clusters UniGene:86794 (1)
    Sequence Information (all 10)
    OTHER sebox GENE PAGES
  • Alliance (1)
  • Gene:282666 (1)
  • VEGA:OTTDARG00000018860 (1)
  • Ensembl(GRCz11):ENSDARG00000042526 (1)
  • ORTHOLOGY for sebox (Chr: 5)
    CITATIONS (38)