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ZIRC
ZFIN ID: ZDB-GENE-021206-2
Gene Name: phenylalanyl-tRNA synthetase subunit beta
Gene Symbol: farsb    Nomenclature History

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Previous Names: farsl, cb428 (1), zgc:92055

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to contribute to phenylalanine-tRNA ligase activity. Predicted to be involved in phenylalanyl-tRNA aminoacylation. Predicted to localize to the phenylalanine-tRNA ligase complex. Is expressed in several structures, including alar plate midbrain region; digestive system; immature eye; musculature system; and nervous system. Orthologous to human FARSB (phenylalanyl-tRNA synthetase subunit beta).
Genome Resources: Alliance (1),  Gene:493608 (1),  Ensembl(GRCz11):ENSDARG00000016864 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027652Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • y307Et Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH farsb HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Rajab interstitial lung disease with brain calcifications 613658
    DISEASE ASSOCIATED WITH farsb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process phenylalanyl-tRNA aminoacylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function aminoacyl-tRNA ligase activity (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA farsb-201 (1)    Ensembl 2052
    ncRNA farsb-002 (1) 939
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM farsb No data available
    MARKER RELATIONSHIPS
    farsb Contained in: [BAC] CH211-245G11 (1) (order this)
    farsb Encodes: [EST] cb428 (1) (order this)
    [cDNA] MGC:92055 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007768 (1) 2041 bp
    Genomic GenBank:BX322538 (1) 159879 bp
    Select Tool
    Polypeptide UniProtKB:F1Q820 (1) 590 aa
    Sequence Clusters UniGene:75498 (1)
    Sequence Information (all 11)
    ORTHOLOGY for farsb ( Chr: 15 )
    CITATIONS (24)