Gene

plod3

ID
ZDB-GENE-021031-4
Name
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
Symbol
plod3 Nomenclature History
Previous Names
  • lh3 (1)
  • cb479 (1)
  • cb816 (1)
  • diw
  • diwanka
  • fb72h05
  • im:6912725
  • wu:fb72f10
  • wu:fb72h05
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have procollagen glucosyltransferase activity and procollagen-lysine 5-dioxygenase activity. Involved in motor neuron axon guidance and neural crest cell migration. Predicted to localize to endoplasmic reticulum. Is expressed in several structures, including axis; chordo neural hinge; mesoderm; pectoral fin; and splanchnocranium. Orthologous to human PLOD3 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
20 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
9 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With plod3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Lysyl hydroxylase 3 deficiency 612394
Associated With plod3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR001006 Procollagen-lysine 5-dioxygenase, conserved site
Domain IPR005123 Oxoglutarate/iron-dependent dioxygenase
Domain IPR006620 Prolyl 4-hydroxylase, alpha subunit
Homologous_superfamily IPR029044 Nucleotide-diphospho-sugar transferases
Domain Details Per Protein
Protein Length Nucleotide-diphospho-sugar transferases Oxoglutarate/iron-dependent dioxygenase Procollagen-lysine 5-dioxygenase, conserved site Prolyl 4-hydroxylase, alpha subunit
UniProtKB:A3KNH4 730
UniProtKB:F8W5U8 185
UniProtKB:Q1L618 730
UniProtKB:F8W3X8 58
UniProtKB:A0A2R8QKS4 730
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations