Gene

elob

ID

ZDB-GENE-020415-1

Name

elongin B

Symbol

elob Nomenclature History

Previous Names

cb162 (1)
tceb2 (1)
wu:fb47e08

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to be involved in transcription elongation from RNA polymerase II promoter. Predicted to localize to VCB complex and elongin complex. Is expressed in several structures, including axis; mesoderm; notochord; retina; and solid lens vesicle. Orthologous to human ELOB (elongin B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2001

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb162 (7 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With elob Human Ortholog

No data available

Associated With elob Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000626	Ubiquitin-like domain
Family	IPR039049	Elongin B
Homologous_superfamily	IPR029071	Ubiquitin-like domain superfamily

Domain Details Per Protein

Protein	Length	Elongin B	Ubiquitin-like domain	Ubiquitin-like domain superfamily
UniProtKB:F1QF30 InterPro	119

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	elob (1 of many)-201 (1) Ensembl	Ensembl	321 nt	Select Tool ZFIN BLAST
mRNA	elob-201 (1) Ensembl	Ensembl	1,715 nt	Select Tool ZFIN BLAST
mRNA	elob-202 (1) Ensembl	Ensembl	1,756 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations