Gene

irx5a

ID
ZDB-GENE-010716-2
Name
iroquois homeobox 5a
Symbol
irx5a Nomenclature History
Previous Names
  • iro5 (1)
  • ziro5 (1)
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have sequence-specific DNA binding activity. Involved in embryonic skeletal joint development and regulation of chondrocyte differentiation. Predicted to localize to nucleus. Is expressed in several structures, including brain; head; hindbrain neural plate; mesoderm; and midbrain neural keel. Orthologous to human IRX5 (iroquois homeobox 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
22 figures from 14 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With irx5a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Hamamy syndrome 611174
Associated With irx5a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR003893 Iroquois-class homeodomain protein
Domain IPR008422 KN homeodomain
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeodomain Iroquois-class homeodomain protein KN homeodomain
UniProtKB:A0A8M9Q1S3 242
UniProtKB:Q1LXU5 446
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA irx5a-201 (1) Ensembl 1,927 nt
mRNA irx5a-202 (1) Ensembl 843 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations