Gene
nitr3b
- ID
- ZDB-GENE-001106-16
- Name
- novel immune-type receptor 3b
- Symbol
- nitr3b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to be located in plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa26911 | Allele with one point mutation | Unknown | Premature Stop | ENU |
1 - 1 of 1
Show
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain | T cell receptor complex component |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q801W9 | InterPro | 230 | ||||||
| UniProtKB:Q8UV76 | InterPro | 230 |
1 - 2 of 2
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA | nitr3b-001 (1) | Havana | 693 nt | ||
| mRNA |
nitr3b-202
(1)
|
Ensembl | 820 nt | ||
| mRNA |
nitr3b-203
(1)
|
Ensembl | 693 nt | ||
| mRNA |
nitr3b-204
(1)
|
Ensembl | 354 nt | ||
| mRNA |
nitr3b-205
(1)
|
Ensembl | 363 nt |
1 - 5 of 8 Show all
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-97A24 | ZFIN Curated Data | |
| Contained in | PAC | BUSM1-116C14 | ZFIN Curated Data | |
| Contained in | PAC | BUSM1-169I8 | ZFIN Curated Data | |
| Contained in | PAC | BUSM1-173M20 | ZFIN Curated Data | |
| Contained in | PAC | BUSM1-221H6 | ZFIN Curated Data |
1 - 5 of 5
Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001007211 (1) | 700 nt | ||
| Genomic | GenBank:CR931785 (1) | 196531 nt | ||
| Polypeptide | UniProtKB:Q801W9 (2) | 230 aa |
No data available
- Yoder, J.A., Turner, P.M., Wright, P.D., Wittamer, V., Bertrand, J.Y., Traver, D., and Litman, G.W. (2010) Developmental and tissue-specific expression of NITRs. Immunogenetics. 62(2):117-122
- Desai, S., Heffelfinger, A.K., Orcutt, T.M., Litman, G.W., and Yoder, J.A. (2008) The medaka novel immune-type receptor (NITR) gene clusters reveal an extraordinary degree of divergence in variable domains. BMC Evolutionary Biology. 8:177
- Phelps, H.A., and Neely, M.N. (2005) Evolution of the Zebrafish Model: From Development to Immunity and Infectious Disease. Zebrafish. 2(2):87-103
- Yoder, J.A., Mueller, M.G., Wei, S., Corliss, B.C., Prather, D.M., Willis, T., Litman, R.T., Djeu, J.Y., and Litman, G.W. (2001) Immune-type receptor genes in zebrafish share genetic and functional properties with genes encoded by the mammalian leukocyte receptor cluster. Proceedings of the National Academy of Sciences of the United States of America. 98(12):6771-6776
1 - 4 of 4
Show