Gene

nitr4a

ID

ZDB-GENE-001106-11

Name

novel immune-type receptor 4a

Symbol

nitr4a Nomenclature History

Previous Names

nitr4.10 (1)
nitr4.13 (1)
nitr4.1 (1)
nitr4.2 (1)
nitr4.3 (1)
nitr4.4 (1)
nitr4.5 (1)
nitr4.6 (1)
nitr4.7 (1)
nitr4.8 (1)
nitr4.9 (1)
si:busm1-219h16.14 (1)
si:busm1-263j20.4 (1)
si:dz219h16.14 (1)
si:dz263j20.4 (1)

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Is expressed in intestine; kidney; and spleen.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cssl:d0610 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nitr4a Human Ortholog

No data available

Associated With nitr4a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013106	Immunoglobulin V-set domain
Family	IPR052051	T cell receptor complex component
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin V-set domain	T cell receptor complex component
UniProtKB:Q90Z85 InterPro	337
UniProtKB:Q90Z82 InterPro	318
UniProtKB:Q90Z81 InterPro	318
UniProtKB:Q90Z84 InterPro	337
UniProtKB:Q90Z83 InterPro	337
UniProtKB:Q8UV83 InterPro	337

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	nitr4a-001 (1)	Havana	1,014 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	nitr4a-002 (1)	Havana	957 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	nitr4a-201 (1) Ensembl	Ensembl	2,121 nt	Select Tool ZFIN BLAST
mRNA	nitr4a-202 (1) Ensembl	Ensembl	5,858 nt	Select Tool ZFIN BLAST
mRNA	ottdart00000001501 (1)	Havana	1,014 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000001502 (1)	Havana	957 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000001559 (1)	Havana	1,010 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000004070 (1)	Havana	1,011 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000004111 (1)	Havana	145 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000001394 (1)	Havana	309 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000001395 (1)	Havana	309 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations