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ZIRC
ZFIN ID: ZDB-GENE-000822-3
Gene Name: homeobox C11b
Gene Symbol: hoxc11b
Sequence Ontology ID : SO:0000704

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Previous Names: Hoxa11, im:7165141

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity; predicted to be involved in regulation of transcription, DNA-templated; predicted to localize to the nucleus; orthologous to human HOXC11  ...
GENE EXPRESSION
All Expression Data: 13 figures from 3 publications
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2005 [eu752]
  6 figures (9 images) from Thisse et al., 2004 [IMAGE:7165141]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35003 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxc11b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxc11b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxc11b-201 (1) 1398
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hoxc11b No data available
    MARKER RELATIONSHIPS
    hoxc11bEncodes: [EST] eu752 (1), IMAGE:7165141 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_694457 (1) 3265bp
    Genomic GenBank:DU644881 (1) 361bp
    Polypeptide UniProtKB:A0A0R4IDM3 (1) 306aa
    Sequence Clusters UniGene:75785 (1)
    Sequence Information (all 21)
    ORTHOLOGY for hoxc11b (Chr: 11)
    CITATIONS (25)