FIGURE

Fig. 1

ID

ZDB-FIG-180717-22

Publication

Schott et al., 2018 - EmbryoMiner: A new framework for interactive knowledge discovery in large-scale cell tracking data of developing embryos

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Fig. 1

Different possibilities to visualize 3D+t cell tracking data.

(A) Temporally scrollable maximum intensity projection with superimposed centroids of detected cell nuclei (red dots) allows following development over time. (B) Similar to the maximum intensity projections, detected nuclei can be superimposed on interactive 3D volume rendering of the original data. (C) Tracks of all cells can be analyzed from arbitrary orientations in an interactive and highly responsive 3D visualization using plain colors (C1) or quantitative trajectory features (C2, color-code indicates time). The panels show neural crest cells of a zebrafish embryo at 20 hpf (A, B) and the trajectories spanning the entire experimental duration from 12.5 − 28 hpf (C). Scale bar: 100 μm.

Expression Data

Expression Detail

Antibody Labeling

Phenotype Data

Phenotype Detail

Acknowledgments

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