Genomic Feature
tf242
- ID
- ZDB-ALT-980203-1402
- Name
- tf242
- Synonyms
-
- AF42A (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Nüsslein-Volhard Lab
- Current Source
- European Zebrafish Resource Center (EZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 14: 35710793 (GRCz11) (1) Details
- Nucleotide change
- T/G
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>G at position 301 (1)
- Transcript Consequence
- Missense (1)
- Protein Consequence
- Amino Acid Substitution: Tyr>Asp at position 79 (1)
- Flanking Sequence
-
GAGAGAGTATATATAGATGTAATAGAAATATGTAGTAGAAAGTTAAAATCACATCCCAGCAATTCCCAGCAAAATGACAACGCTGCAATGAAAATGGTGCAATTTTATACCTTCAATACTGCATACATTTCTTCCAATTACAGCCTTTCAAATCTGTGCATGGTAAAAGTATGCTAATATATACACTTTTATTTTATTTCAATGCTTTTTTATATTGGCAGCTACAATTAACTTTGAAATTGCAGTTCAAACTGACCCGTTACCACCATAATTGTAAGAAAAAATATGCACCATCCACAACACCCCAAAATGTAAAAACTCATAATTTGAATGACCCTAAATGAATGAATAAAATGCAACATAATGTGAGCAATTCCTGTTATGGCAAAGTCAAATATCCAACACCATTACTCCAGTATTGAGTCAAGTGATCTTTCAGAAATCATGCTCATCTTCAAGGTAGACAGTTAATGCATATTTTGTCTTTTGCTTTACAGGAC
T/G ATCGTGTCAACATCTTCCTGAGACAACGCTGGAATGACCCCAGACTCCGGCTTCCACAGGACTTCAAGTCAGATTCACTTACCGTTGACCCAAAGATGTTTAAATGCCTGTGGAAACCTGATCTCTTCTTTGCCAATGAAAAGAGTGCTAACTTTCACGACGTTACTCAGGAGAACATCCTGCTCTTTATCTTCCGAAACGGAGACGTTCTCATCAGCATGAGGTGAACTTTAATGCTCTCTTCCCTCAGCACACCACACCTCTGTCTTTGTGGATAAAGACAAATGAGCTCTAAGTGCTGGTGACACCTACTCACATTATTTACCACAGCAATTAAAACATAGCAAACACAATAGTTTATCAGATGTCAAGATCGTTGTTAAAGTAGAACAAATTACCAAGCAGGAGTTTAATCAGAGGGTGTTGAAATTATGCATTAATCATATTTACAAGTTAATTGAAGCCTGTTTTGGAAAAGTAAAATATAAATTTTTGAGACG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| glrbbtf242/tf242 | Homozygous | ♀+/- ♂+/- | 2 figures from 2 publications |
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Supplemental Information
- Genotyping protocol
- None
- Ganser, L.R., Yan, Q., James, V.M., Kozol, R., Topf, M., Harvey, R.J., and Dallman, J.E. (2013) Distinct phenotypes in zebrafish models of human startle disease. Neurobiology of disease. 60:139-51
- Granato, M., van Eeden, F.J., Schach, U., Trowe, T., Brand, M., Furutani-Seiki, M., Haffter, P., Hammerschmidt, M., Heisenberg, C.P., Jiang, Y.J., Kane, D.A., Kelsh, R.N., Mullins, M.C., Odenthal, J., and Nüsslein-Volhard, C. (1996) Genes controlling and mediating locomotion behavior of the zebrafish embryo and larva. Development (Cambridge, England). 123:399-413
- Haffter, P., Granato, M., Brand, M., Mullins, M.C., Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J., Jiang, Y.J., Heisenberg, C.P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C., and Nüsslein-Volhard, C. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development (Cambridge, England). 123:1-36
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