Genomic Feature

sud130

ID
ZDB-ALT-250123-21
Name
sud130
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Akinori Kawamura Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 3
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 23704088 - 23704097 (GRCz11) (1) Details
Nucleotide change
TCAGCGCCGG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AACACCCCCCCACCCCCCAACTCAAACCCAATCTCCGATAAACTACTAATAGCTAAACCACTTGGACTATAAAACACAACAAATCATAAACCAAGCAAAAGAGCCGTACCCTCCCAATGAGTTCCTATTTTGTAAACTCAACTTTCCCAGTGACTCTGCCCGGAGGACAGGAGTCTTTCTTGGGACAGATACCGTTATATTCCTCCGGATACACAGACCCTTTACGACACTATCCCGGTGCTGCTTATGGAGGTTCCAGTGTCCAAGAGAAGGCGTACCCATCCTCCTTTTACCAACAAGCGAACGGCGCTTACAGCAGGGCAACCGCCGCTGGTCCATGCGATTATGCGACAGCAAGCTTTTACAGGGAAAAGGACCCTGCCTGCGCCCTCGCCAGCATAGAGGAGCACTCGTTCGTTCTCAGTCAGGATCATCGCAAGACAGACTGCACGGGCTCGACGGGGAAAAGCATCTACCCTGAGGCCGACGAACAGAAGCCG
TCAGCGCCGG/- TTTACCCTTGGATGCAACGGATGAACTCATGTAACGGTAAGTTAATGTTATCTTTTTTGCCTTTCATTTTTAATACGTAGCTAGTGCGTACTATACGTAGCCTAACTTACCGCTTCACTGTAAAATGCCGGAAGCCCATACAGTGCAAATGCGCATTCTCTCTACCGTAGTCATACTGAAAGCAAAGCCACTCCTGTAAAGTTCTGTGAAATCTCATATGTACAGTACTTGTTTTTGAGGGAGGACGTTTAGAAATATGTTCGCCGCAAGGCTCATATCATTTAAATCACCGAATAAGCTTCTCTAATTATAAACAGAAGAGCTGCTGCACCACCGCATGTCTTACTACAAAAATGACCATTGTTTTTGTTTTGACACATCTGTTGCTGTTTGTGTCTTCTTGTTATAAGAAAAATAGACAGTACGTGGTAGTATAGAAAATATGAATTATATTCTGAAAGACTACGCAATAGTTTATGAAACAGTGCCAACAACAGAAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hoxb6asud130/sud130HomozygousUnknownFig. 2 with image from Maeno et al., 2024
hoxb6asud130/sud130; hoxb6bsud137/sud137ComplexFig. 2 with image from Maeno et al., 2024
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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