Genomic Feature
ihb876
- ID
- ZDB-ALT-250122-16
- Name
- ihb876
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yonghua Sun Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| 17bp deletion ，Between 59bp to 77bp of the wild-type atxn2 coding ... | Zebrafish Nomenclature Committee |
- Genome Browsers
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 5: 42590982 - 42590998 (GRCz12tu) (1) Details
- Nucleotide Change
- CCACAATATCCTCACGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 17 bp deleted in Exon 5 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CAGATTCTAAATGGTATAGATGTTAGACTGAAATAATCACATAAAAATGAAAGAAGATACTGAACTGAcctttttaatcaaacaattctAAAAAAACCCTGGCCATCATGGGAGTTATAACTAATAGAATTATTTTATTCGATATTGAGTGATAATAGTAAGATAGTCATAGAAAATGAATTGCACGAGAAAAAACGTTCTGTTGTTTGTTCTTATTTATTGGCTAATACAATCCATGGTGTAATGTTAACCCTTCAAAACAATGTAGGCACTAATTGTGATATTAGTGAACTGATCATTTTCCTCCGCAACTTGCAATTAGTATAACACCGTTTAGCTACACTATATCTACATTGTAACTTCACAGAGCTCAAACCTGTAAAACGCCCATTAAAGTAGCAAGAATATTTGACAGAAGGTCTCACCTTTCTTGGCATAGTTGAGGTCCACATCTTTGAAATGAACTACCACTACATCTGAGGACTTGAAGATGATGCTCT
CCACAATATCCTCACGG/- CGAGGGCCCGCATTAGGTTCTACACTCTTCCTGTGTGCAGCATCCAAGACAATGTCACACTGCAAATGAAGAGCCCAcgacaataaaaaaaatggacATATGTCACCTATGTCCGAACTAGAATTACATTTTTCTTGTGCTTAACAGTGATAGAAATGCTTAACATCAGCAATACAAAGTGGTATCCTTACCTCTGGGCCATATGTTTTAAAAACCCCTTCATAGATCAGGCCATTTTTAACCTTAAGTTCACATTTGGTTCCCTGTTGAGTGGTGAACCAGAAAACGAAATTTCAGTAGGAGTGTATTTGTTGTGCTTTggtaaaactgattaaaaaaagaatataattacagctgtgcatttatacttacCACAACTGAGGTCAAAACATGAACCATCCTCATGTTTGCATAAACTCCATTGAAGGCCACCTAAAAAAGAACAATCAACAACATTTCTGCCTGAGGTAAAGAGATATACAATTTACAAGTATCTATAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None