Genomic Feature

x70

ID
ZDB-ALT-240312-2
Name
x70
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Riley Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 23
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 28024632 - 28024636 (GRCz11) (1) Details
Nucleotide change
AGGAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GCCCAAAACCAGCTGCCGTCCCAAGGAGAAAGGGTGCCCGGAGGGAGCGCTGTTACCCTGGGGGAGACTCCACCACTGCTGGCCATCCTCAACGTGACCTCCAGGCAGGTGAGCTCTTCCTGAGGGGTTTTGGAGGAAGCTTGGAAAGTTTTGACTGACGGCGTTGTGCTGCGTGTAGTATGGCGCATTCCCTTGCATTTTAACCGGGGAAAGCTCGAATGAATATGCAGACGGAGGCTCCGCTGGAGGAGTGAGGGGAAGCTCGTGGTGGTGATGATGGTGGTGATGGTGGTGATGGGAGTGCGAGCCCAGAGTGGGTTGCATGTGGCTGGGAAACTGCATTTTGGGCACGGTGAAGGTCATCTGGTGAGCGCTTAAGCTGGAGTTCGGGGCCACGTCGTTGCTCCAGAGCTGGAACATGCTGGATGCGGAGCCCACCGGACCCTCGTAAGGGAGCTGCGAGCCTTCCTGCCAAGCCTGACTGCATGTGGTGGCCAGAA
AGGAG/- AGGGTGTTTGGACCACTTTCTGGAGATGAGCTGGGAGTGCGGTCCTAGGGGGAAGAAAACAAATATTTGCAAATAAGTCACATTTAATATTTTGAGTTGGAGATGCAAAAAGTAAAATATATTTAATTTCTTTCTTATTTAATATTAATTGTTAATAATCTTAAGTTTAATTTCCATTTTATTTTTTTTTTTATGTTAAATTATTTTTTGAAATGTAAAAAAAAATGGTATAATTACAAAATCAAAACTGAAAACAAGGCAGCTTACATCTATTTTATCAATTTATTTAGTAAATTAAGTTTATTATCTTACTATTATTTTGGAATTGTTTTACAATGATAAAAACTAAAAACAAGTTTGAAATTCACCTAATTTAAATGTTATGTATTATGTTAATCAGTATATTTAGAGTATAATAGTAGTTTAAGTTAAAATTTTTCAAATAAGGTAAACAATAAGATAAGATGACACCAAAGTAGCTTTTAAGATAATTTTAATCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
sp5ax69/x69; sp5lx70/x70Complex2 figures with image from Tan et al., 2022
sp5ax69/x69; sp5lx70/x70 + MO1-sp5a + MO2-sp5lComplex2 figures with image from Tan et al., 2022
sp5ax69/x69; sp5lx70/x70; s356tTg/s356tTgComplexFig. 11 with image from Tan et al., 2022
pax2atu29a/tu29a; sp5ax69/x69; sp5lx70/x70Complex2 figures with image from Tan et al., 2022
pax2atu29a/tu29a; sp5ax69/x69; sp5lx70/x70; s356tTg/s356tTgComplexFig. 11 with image from Tan et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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