Genomic Feature
uq5rp
- ID
- ZDB-ALT-230630-7
- Name
- uq5rp
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Parton Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 2: 42191850 - 42191851 (GRCz11) (1) Details
- Nucleotide change
- -/C
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1 bp inserted in Exon 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CACAAACACACACATTTGTGCTCTTCATTAATGCCACGGTGATTTTAGATATTTCAGAGACACACAGTATGCATATGCACAAGCCACTCGAACACATGCACACCATGCAGCAGCGTATGAATTAAAGGGGCTTTCCAACACTTCTGTGATACAGCTTTCAGAAATGTCTCAGGATCATCTTACAGTTGTATTTATATCCATGCATTTATATCTATGTGTGTGTGTGAACAGGGGTGGAGTTCGTCAGATTCCAGTGGGGTCTCTCTTTAGGAGTGTCAGTTTCTCTTGATACTGTGCGTTTGAGTCCCTTTACCCATCTCTGGCTGCACTTTCAGGGAGAATTGGAGATGGAAAAGAGAGGAGATGTCATATTAGGGGTTGAGGATGAATCCGGGCAGCCCGTCTCTGCCCTGTCCATTCTGTCTCTGCTGGAGCGTGTGTCAACAATCATCGATGGCGTCCAGGCAAGCCAACAGCGTATGGAGGAACGCCAACAGCAGC
-/C TCGAGGGCTCGGTCAGCGCTGTCCAGTCCGAGCTTCTCAAACTGGCTCGTGACCACGGGGCCACAGCGACGACCGTCGACAAACTGCTGCAGAAGGCCCGGCGTGTGAGCACACACGTTAAAGAAGTACGTTCACGTGTGGAGAAACAGAACGTGCGCGTGAAGAAAGTGGAAACTACGCAAGATGAGCTCCTCACACGCAACAAGTTTAGGGTTGTGATCTATCAGGTAAAATCACATCCACATGTGGGTTATTGGTGAATGAGGGTGTGCCGTTTTGAAAGCTGGTTCTGTCACACATATCAACAGGGGGCGCACTTGAGAATTCACCATTCTAGAGGTGAATGGGTTGCCTGTTTCTTTTAGTGTGACGGATGAGTGTCATACAGATATTTTTGATATGCCTATTGGGTTACACGGTTTACCGGTAGCACCGCAATACTATGGCACCAAAATAATAGCGGTGACACTATTGTTTGTAAATGGTGGTATCGTCATTAAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| cavin4auq5rp/uq5rp | Homozygous | Unknown | |||
| cavin4buq6rp/+; cavin4auq5rp/+ | Complex | ||||
| cavin4buq6rp/+; cavin4auq5rp/+; uq11rpTg | Complex | ||||
| cavin4buq6rp/uq6rp; cavin4auq5rp/uq5rp | Complex | Fig. 4  from Lo et al., 2021 | |||
| cavin4buq6rp/uq6rp; cavin4auq5rp/uq5rp; pc10Tg | Complex | Fig. 3 from Lo et al., 2021 | Fig. 3 from Lo et al., 2021 | ||
| cavin4buq6rp/uq6rp; cavin4auq5rp/uq5rp; uq11rpTg | Complex | Fig. 3 from Lo et al., 2021 | Fig. 3 from Lo et al., 2021 | ||
| cavin4buq6rp/uq6rp; cavin4auq5rp/uq5rp; uq16rpTg | Complex | Fig. 4 from Lo et al., 2021 | Fig. 4 from Lo et al., 2021 |
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Supplemental Information
- Genotyping protocol
- None