Genomic Feature

sh401

ID
ZDB-ALT-230613-3
Name
sh401
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Malicki Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 25
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 5018927 - 5018937 (GRCz11) (1) Details
Nucleotide change
CTGGTGGACAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted in Exon 4 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GAATCACACCACATTTCCATTCCTGTACGAAGAATCTTTGGTTCAGAATTTTTCATGTTGAATGCAGTGAGGAGTACCTGGAGGCGGTCAAACAGACGCCAGGCATGAACGTAGAGGAGCTGATGGCGTTTTCCAAGAAATACAATGATGTCTATTTTCACCAGGTACTGTAGAAATCCAGATTATGTTCATGTACGGAGCCACTTAAGCTTTTATAACCGAAGGCCTTTAACCTCGGCCTTGCTGAAAGGCAAGATCTACCCATCAAAAAAACTTCACCGAAAAATAAAGCTTCATTTGCATTTCCTGCTTATGACCTTTAACTTTTTTGATCCATGTAAAAAGCACTCGTTTAACCTAAAATCTGTCGCCATTTTACTGTGGCAGTAGCAGTAATCAGATCAAATGAAACGCATGTGAACTATTTCAGTATGTGTATTGAAATACTCCTGCAGAACATTTATCACTGTGCGAAGCTGGCGGCGGGAGCAACTCTGCAG
CTGGTGGACAG/- TGTCATGAAGAGAGAGGTCAGAAACGGCATGGCGCTGGTCAGGTGAGCACAAGCAAAAGAGCAATATTTATATATTAAATAAATGCCCTGCAAGTTGCCTCGTTCATGGGTAACCTGAAGTAAAAGTGTGATTATTTCATCACCAGACTCTAACAAAAGAGCAGTCACTTCTCTAAATGTAAATGTTGAATATTTGTAGATTTAAATGTTGAATATTGATTTAGTAATGTAAATGTTATTTGCTGCTAGAATTGTGGGTGTTTGAGACAGGGCTACCGCTTTGTCTTAAACTAAAATAAAATAACATTTGTCATAACTGATCAATATTTTCTGAATATTTAATAGAATTTAAGTTGAATGTTTTATTTATTTAATTTATTTATTTTTTATATTTAACTGAATAATCTATATTTAATGCTTAAATGTATACATTGCATTTTATTTATAATAATTTAAATCATTATTTTATATATATATATATATATATATATATATATATA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hdac10sh401/sh401Homozygous♀-/- ♂-/-FIGURE 1 with image from Łysyganicz et al., 2021
hdac10sh401/sh401; hdac6sh400/sh400ComplexFIGURE 1 with image from Łysyganicz et al., 2021
hdac10sh401/sh401; sirt2sh626/sh626Complex
hdac10sh401/sh401; hdac6sh400/sh400; sirt2sh626/sh626Complex3 figures with image from Łysyganicz et al., 20212 figures with image from Łysyganicz et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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