Genomic Feature
tum112
- ID
- ZDB-ALT-230609-3
- Name
- tum112
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Tim Czopka Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 11: 23843402 - 23843429 (GRCz11) (1) Details
- Nucleotide change
- GAGCCAAACGGTGTCCTGATTGGATACA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 28 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TAGTGCAAATGTGTTCTTGCAGATATTCACATAATGTACCTTATGATTACATTGTCTATTAAAATTGCTAGGATTGCTAATTGACATCTCTTTTCATCATATTCTCAGTTGTACTACTGGCGGGAGGCCAGCCTCATAAAGGGCCTGAAAGTAAATAAGACAAAGTTGCATAAGGGATTCTTTACCACAGCAGAACATCCCTCTGGCATCCTGACAGAGCTCTATCCATACAGCAAATATAAGATGTATATGGTGGTTGCTAACCGAGAACATGAAGGGCCGCAAAGCAATACTGTGGAGTTTTACACCAAGGAGGGAGGTATGATTTGTCATACGCTGCTGTAATGTTGTAGAATGATGACTTATTAAATATGTGCTGTTTGTAACAAAAAGCAAAATATGAATAGTTGTTATGATCTCTCACAGAGCCAGGGGCTCCAAAATACTTTAGGATTCTAAGACACACGGACGTGGTTCACCTGAAGTGGGACAAACCACTG
GAGCCAAACGGTGTCCTGATTGGATACA/- CACTCCAGTACCACACAGGTAAGCTCACCTTCCCAAATACACTCAGAAAGCCAGAACATGATGAAAAAAATTATAATAATGCTATATGCACTCAGAATTCTTAAGCAAACGATTAGAAACATGTTACATGAACTCAACATATGCTTACAAATGATTAGAAACAATACATGTACTCAAAACCTTCTAGAAAATTATTATTAGTATGTTATGTGCACTCAGAACATGCTAGTGAACAGTTATAAACATACTATGTGTATTTAGTAATGTTGTAGCTACATGTTAATAACATCCTTGTAAGGGATTAGAAACATCCTGTGTGCACTCAGAACACATTAGCCAACATTAAGAAACATGCTTGCAAATTGCAAATTATTATTAGCATGTTAAGTGCACTCAGAACATGCTAGTGAACAGTTATAAAGATGTTATGTGTATTTAGAACATGCTAGCAAACAGATGTAGAAATGTAGCTATGTTAATAACATAATTTTAAGGGACTA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| nfascatum112/tum112 | Homozygous | Unknown | |||
| nfascatum112/tum112; tum101Tg/tum101Tg | Complex | Figure 4  from Vagionitis et al., 2022 | Figure 4 from Vagionitis et al., 2022 |
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Supplemental Information
- Genotyping protocol
- None