Genomic Feature
oi6
- ID
- ZDB-ALT-230607-3
- Name
- oi6
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Toshikatsu Hanada Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 17: 18794262 - 18794266 (GRCz11) (1) Details
- Nucleotide change
- CCAGA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AGAGAAAAAAATTCACAGGAGGCTAATAATTTTTTTTATGTATCTAAAGAAGAACCTAATGTTTTTGTTGTAGTGTGTGTGGTACTATTATTTTATAATTAGAACTATTTTTATAAGTACACATTTATTGTTACAATTATCATCCTTGTTGTGACTCTAACTACTTATTAGAAATAAACACATTACTGGAGCATATGTATACATAGTTTTTGTCCCTACCACTTTAATGACATAAGGTGCATCAGCGGTGACAGGTCCTGAAGAGTCTTCATTTGCTAAGAGGATGAAAGACATATTTACATGTTTAACCACTGATAAATAAAAACAAAAACAATAAATATTAGAACCTCGTAATTTCCTTTGGACTAAGCAGAAGGAAAAGGAATGAATTTCCTTTGGCTTTTTTCTTTATCTTACCAAGATACAGCAGGCCAAAACCTCCTTGTCCAACAGCTGATCCAAGCTTCCATTTTTTCTTTGCGTTATCTGTCAGGACTTCT
CCAGA/- CGGGAATTCTTCAGCCAGTTTCCTCTTAGCTGGAGCTCTTGCTTTCTTCACCCCGTCTGCCTTCTTTGGTGGCATCTTCCTTATTTATAAAAACTTTAAAGAAAAAGAACCCAAGCTCCATTAGAACAAAAGTGGGGACCAATCGTAGTTAAGAATTTATTTTACATTATTTACTTTTGTTTAATCTTTTTTTCCATTGTAGATAATAATATAGGCAAACAATAAAAAAAATGTAAAACAGTAACTAAAAAATGCACAATGTCTACATAGTGTTTATATCTTAATAATGACCAGAGATCATTCTTTGAGATTGTATATTTTTATGACTTTAAAATATACTAACACGTACACTTCTTTGCAGAAATGCGCCAACTTGTCAAGATTTTCTCTAACCACTGTAACCACACATATTTGATACATAAAGTGGTGGTCAAAGTTAATAGAACACATGACAGAAAAAAAAATATACTATTTTCGCCTCTAAAAACATGTTTTAATTT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ankle2oi5/oi5; vrk1oi6/+ (AB) | Complex | 2 figures from Apridita Sebastian et al., 2022 |
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Supplemental Information
- Genotyping protocol
- None