Genomic Feature
sbu310
- ID
- ZDB-ALT-230321-18
- Name
- sbu310
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Sirotkin Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 3: 1307722 - 1307728 (GRCz11) (1) Details
- Nucleotide change
- TAGCGGT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted in Exon 10 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TATTGCGGATGTTCCTCTCGGTGCTGCCGTTCGGGACCGTCCCGAAGCGAAACGGAGGAGAGAAATCATTGGGATTCTGAAACTGAAGACCAAACACAGAGTGAGCAAACAAACGAATGGGCCATCTCCACCCAGCGGAGCGGTGCGGTTCACTATGGTACTGAACCGTCCTGTACTGAACCGCACTGCTGACTGTAGAGCAGGGGTCACCAAACTTGTGCCTGGAGGTCTGGTGTCCTGCAGAGTTTACCTCCAGCCCTAATCAAACACACCTGACCATGCTGATCAAGCTCTTACTAGTTGAAACACCCAGGCAGGTGTGTTGAGGCAAGTTGGAGCTAAACCCTGCAGGGCACCGGACCTCCAGGACCGAGATTGGTGACCCCTGCTGTAGAGAATCATGAGCTTCACATTCTCGATGGTCTACTGATGCACCTTCTTGTCGCTGAGGCCGGACACCTGGTCCACGTACTCCTCCTGGATCATGAACGCAGCCAGGT
TAGCGGT/- GTAGCTGGCCAGGAAGATCACAGCGAAGAAGGCCCAGACGGAGACCATGATCTTGCTGGTGGTTCCTCTGGGGTTCTGCACCGGCACAGAGTTATTGAAGACCAGACCCCACAGCAGCCAGATGGCCTTCCCGATGGTGAAGGAGGGCCCGCCGGCCTCTGAGCACACACACACACACACACACACACAGGTCACACTCAAGGAGAGCAGTCTGTTCATCAGTGCTGACGGTGAAGAGAGAAACATTCTCTATCTGCTGCTGTTGGTCATCTACACAGCACTGAGCTCAGGTCACAGAGAGCGCTCAGACTGCAGTAGATGCTGCTCCTCATGAACCTGGAGCGTACAGCATCAACACAACACACTGAGCTGAACACTGCTCTCCCTCCTGTGACCCCGGATGTCTGCGGGGGTCAGAGCTCTATACTGAGAGTGTACTCAGACTGACCTCTGCCGTCTGCCAGACAGCGGTTGTAGCCCACAGGACTGAAGTACTCGAA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| grin2basbu310/sbu310 | Homozygous | Unknown | 3 figures  from Zoodsma et al., 2022 | ||
| grin2basbu310/+ | Heterozygous | Unknown | Fig. 3 from Zoodsma et al., 2022 | Fig. 6 from Zoodsma et al., 2022 | |
| grin2basbu310/sbu310; grin2bbsbu311/sbu311 | Complex | 3 figures from Zoodsma et al., 2022 | Fig. 6 from Zoodsma et al., 2022 | ||
| grin2basbu310/sbu310; grin2bbsbu311/sbu311; nns9Tg/nns9Tg; ot1Tg/ot1Tg | Complex | Fig. 7 from Zoodsma et al., 2022 | Fig. 7 from Zoodsma et al., 2022 |
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Supplemental Information
- Genotyping protocol
- None