Genomic Feature

vu2

ID
ZDB-ALT-230301-4
Name
vu2
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Skaar Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 8
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 30426208 - 30426218 (GRCz11) (1) Details
Nucleotide change
GATCCCGGTTA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AGCTTGTATCGCCGCTCTATGAAATATTGCATATTTAGTACAAACTGGACGCCAGATCGCATTCAACAGGTCATGTTTTAAAGGAATACTTTATCTAAGCACTCGAATTTCACACAGTGTAAGTTCTCTTTTGTATGTGTTTGTTAGCTTTTATTTAATGCTTGACGCTTGTAGTTATAGACAGCTCGTGTTTGACAGCCATTGACAGCACATGCGTTCAAAGCTCATATCTGTCAAAACAGGTAAGCTGTAATATATGTCAGGGTTAACGTTACATTCGACCCCTGTTGTGAAAAACCTTCTATGGAAGGAAGAATGAAAATCGTGTCCTGTCATTTTACATATGCATATGCACCTCCTTTAATATGAAGCACAATTTGTGTGTTTGTTTTTATTTTGTAGACTGACTGATTACTTCAAGCAATCTGAGTAATGGAGGATGAGGATGAATGTCCAGAGTTAGTTCCTATCAAGGAGAAGCCCAGTGGACCCACAGCTCA
GATCCCGGTTA/- CCATTATTACTGGATACTTGGGTTAGTTTTTTAAGCTGTCTGATTAACTATTAACAGGCAGAAAGTTTATGTCTGTTCCAACACCTCATTTGATTTGCATAGATTCATTCATTTTCCTTCAGCTTAGTCCTTTATTCATCAGGGGTCGCCACAGCTTAATGAATCGCCAACTTATCCAGCACACATGTTTTACACAGTGGATGGCCTACCAGCTGCAACCCAGTGATGGCAATCACCTGTACACACTTATTCACACTCATACATTATGGCTGAAATCAGAATTTAGACTGTGGTGGAAACCGGAGCACCCGTAGGAAACCCACGCCAACACGGGAAGAACATGCAAACTCCACACAGAAATGCCAACAGACCTAGCCGGAACTCGTACCAGCGACCTTCTTGCTGTAAGGCAACAGTGCTAACCACTGCGCCACCGTGTCTCCATTTACATAGATTGTGCAAGTAAAATATGCTCAGTAGCCACGGTTTATAAGGTAATC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cbwdvu2/vu2HomozygousUnknown2 figures from Weiss et al., 2022Fig. 5 from Weiss et al., 2022
cbwdvu2/+HeterozygousUnknownFig. S5 from Weiss et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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