Genomic Feature

vu1

ID
ZDB-ALT-230301-3
Name
vu1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
Lab of Origin
Skaar Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 8
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 30426207 - 30426211 (GRCz11) (1) Details
Nucleotide change
AGATC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CAGCTTGTATCGCCGCTCTATGAAATATTGCATATTTAGTACAAACTGGACGCCAGATCGCATTCAACAGGTCATGTTTTAAAGGAATACTTTATCTAAGCACTCGAATTTCACACAGTGTAAGTTCTCTTTTGTATGTGTTTGTTAGCTTTTATTTAATGCTTGACGCTTGTAGTTATAGACAGCTCGTGTTTGACAGCCATTGACAGCACATGCGTTCAAAGCTCATATCTGTCAAAACAGGTAAGCTGTAATATATGTCAGGGTTAACGTTACATTCGACCCCTGTTGTGAAAAACCTTCTATGGAAGGAAGAATGAAAATCGTGTCCTGTCATTTTACATATGCATATGCACCTCCTTTAATATGAAGCACAATTTGTGTGTTTGTTTTTATTTTGTAGACTGACTGATTACTTCAAGCAATCTGAGTAATGGAGGATGAGGATGAATGTCCAGAGTTAGTTCCTATCAAGGAGAAGCCCAGTGGACCCACAGCTC
AGATC/- CCGGTTACCATTATTACTGGATACTTGGGTTAGTTTTTTAAGCTGTCTGATTAACTATTAACAGGCAGAAAGTTTATGTCTGTTCCAACACCTCATTTGATTTGCATAGATTCATTCATTTTCCTTCAGCTTAGTCCTTTATTCATCAGGGGTCGCCACAGCTTAATGAATCGCCAACTTATCCAGCACACATGTTTTACACAGTGGATGGCCTACCAGCTGCAACCCAGTGATGGCAATCACCTGTACACACTTATTCACACTCATACATTATGGCTGAAATCAGAATTTAGACTGTGGTGGAAACCGGAGCACCCGTAGGAAACCCACGCCAACACGGGAAGAACATGCAAACTCCACACAGAAATGCCAACAGACCTAGCCGGAACTCGTACCAGCGACCTTCTTGCTGTAAGGCAACAGTGCTAACCACTGCGCCACCGTGTCTCCATTTACATAGATTGTGCAAGTAAAATATGCTCAGTAGCCACGGTTTATAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cbwdvu1/vu1HomozygousUnknown2 figures from Weiss et al., 2022Fig. 5 from Weiss et al., 2022
cbwdvu1/+HeterozygousUnknownFig. S5 from Weiss et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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