Genomic Feature
st125
- ID
- ZDB-ALT-230227-11
- Name
- st125
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Talbot Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 11: 25510503 - 25510527 (GRCz11) (1) Details
- Nucleotide change
- CCACCACACTCGGCAATAAAGTTGC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 25 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CTATTGCACAGAGTGAAATGTGTGTGGCCTTTGCACATGTATTGCTTAATGTTCAATGCATTAGGTTCCTTATATGTAGCAGCACTTATACATTATTTATATAAGATAACATAAATAATTGCAGTACATTTCTAATATAATTCAAAGTTTTATATATAATTTAATAGTATATGTTTTTTTTAAATCGAAATACATACTTTTAAATAGAGGTATGCATTCTTCAGTGACATTAAATTATTTTAGCTTCACAATTTATTTTGAGATTAAATGCAGTGTAAACTCCTAAATGTTTGTTCCTCTTTAATTAAAAGTGGCAACATTTCCTTCTTTATGACTAATGCATGGACAACAGTGCAATATGTAGCATGAAATGTCCCTTATGTCTTTGCATGAGCTCTGATGGAGTGTTTTTATTTGGGTGTAGGTGCAAACCCATCTGGAAAACCCAACTAAATACCACATCCAGCAGGCGCAGAGGCAGCAAGTGAAGGAGTACTTGT
CCACCACACTCGGCAATAAAGTTGC/- CACGCAAACTCTCGGTGTGTCTCCTGTCCCGCATTCAGCCTCGGCTCCAGAAATGGGCCCATCAGCAAGCAGCGCTCCCAACAGCCCCATGGCACATCTTAATCTAGGCTCCAACAAAGAAGAGGTAAAGCACATATACATAAATATACATTGTGTACTGATCATGCCTTTCAGATGCAAAGGCCAAAAACAAGAACTGTGTTCAGGGATGCATGTAACTTCTCAAAGTTGTACCGGGATATGTTTTTTGAACTCCCACTGTTCATAGCACAGCCATCCTATGTGCAGTCATATTAACTATTAAGATGTTAAAATCTTAATTGACACCTTTCTATAAAATGAAAGCTCTGCAGCTTGACAACAGTATTGCACTTGACGATCAACTGATTTAGCACAGTTCTTGAGGACGGGGCATAGAATGTGCACTACGGGAACCCAGATTATCTGAAACAATGCCATTGTAAACTACAACACTGACAGCAACTCCATCTCTGTGCACT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| rragast77/st77; tfe3bst125/st125 | Complex | Fig. 4  from Iyer et al., 2022 | |||
| rragast77/st77; tfe3bst125/+ | Complex | Fig. 4 from Iyer et al., 2022 | |||
| rragast77/+; tfe3bst125/st125 | Complex | Fig. 4 from Iyer et al., 2022 | |||
| rragast77/+; tfe3bst125/+ | Complex | Fig. 4 from Iyer et al., 2022 | |||
| tfe3bst125/st125; tfebst120/st120; flcnst127/st127 | Complex | Fig. 5 from Iyer et al., 2022 | Fig. 5 from Iyer et al., 2022 | ||
| tfe3bst125/st125; tfebst120/st120; flcnst127/st127; gl22Tg/gl22Tg | Complex | Fig. 5 from Iyer et al., 2022 | |||
| tfe3bst125/st125; tfebst120/st120; flcnst127/+ | Complex | Fig. 5 from Iyer et al., 2022 | Fig. 5 from Iyer et al., 2022 | ||
| tfe3bst125/+; tfebst120/+; flcnst127/st127 | Complex | Fig. 5 from Iyer et al., 2022 | |||
| tfe3ast124/st124; tfe3bst125/st125; tfebst120/st120; gl22Tg/gl22Tg | Complex | Fig. 7 from Iyer et al., 2022 | Fig. 7 from Iyer et al., 2022 | ||
| rragast77/st77; tfe3ast124/st124; tfe3bst125/st125; tfebst120/st120 | Complex |
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Supplemental Information
- Genotyping protocol
- None