Genomic Feature

ot300

ID
ZDB-ALT-230123-2
Name
ot300
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Akimenko Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 30537646 - 30537650 (GRCz11) (1) Details
Nucleotide change
TCCAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCATACAAAGTTTAACGAACTGATATACATTTATTTAAATAAACACTTTATTTGTGTCCCCAGTAGAATTATAACTAAATCTTAAGTGCATCAACTTTTTTTACTAACAACAACCCTCCTAAAATCAAATGTTGCAACTTACAGTACGTCTATAGTCAACAGAGTCTCAAAAGGAGGCCCTTTTCTGTCATTTTGATGTTATCTTGTTTATATTAATAATGTACTGGTGGAATTAGGGCTTAGTCATGTTCTCTTAGACAAGCAATTAGTAATTTAGGTGCTTGAATGTGTGCATATTACATAGCTGACCTCACTGAAGCAACACAGTCTAAAAGTGCCTGCTCAAGCTTCTAATAATGGCATGAACTGTTCCTTGTGGTTTAAACCTGTTGCTCACAAACATGTTTAACTACAGCACCAGACCACCCAAACCCTTAATTATCCAGCCTTCAGGAGTCGTCACCTTGGCCAGCTGGGCTTTCAAATCTCTGACTTCCACC
TCCAG/- TGTTCTCTTCTCCCCCAGAGCTGTGGAGAGAGACGCGTCCTTGGAGTTCAGTAGAGACTCCAGATCCTTCAGCCTGGCCAGAGCAGATTCCAGATCTGCTTCTTTCTTACCGTTCCTGCAGTTGCGAAAATACAGAAACATCATTAAAGTGTTGTTTCATGTAGACAGAACACAATGATCTCAATTACACTCTGTAAAGTGGCATTATTATATTTGTTCATTCATTATGTGATGAGTAGAAAGTCTCTTATTATTTTAGACATTTGAAAGCAACTAGCATTTTTTTAGCTGTAAGAACTGATCTAAGACTTTAAAACATGAATCTGTTTAACATCCAAAATATTGAATCATAACATTTGCCAAGTAGCATGGCTGGAACAATCAGTTCAGTGGAAATGAACACTGCCTGTGATTTTGTTCCGGAAAAAAAGCCAGGGACCTTTTAAAATCTGTAAACAATAACTTTAAAAAGCTCTCTTTGAAACAGAGCAGGATTTGGG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
lmnaot300/ot300Homozygous♀+/- ♂+/-3 figures from Nicolas et al., 20212 figures from Nicolas et al., 2021
lmnaot300/+HeterozygousUnknown2 figures from Nicolas et al., 2021
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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