Genomic Feature

ci1016

ID
ZDB-ALT-230113-1
Name
ci1016
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Waxman Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 12
Variants
Variant Type
Small Deletion
Variant Location
Chr 12: 20629895 - 20629932 (GRCz11) (1) Details
Nucleotide change
CCAGAGGACAGTAAGTAATTTAGCTTTCACTTGGGTTT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
38 bp deleted in Donor Splice Site of Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AACCATCAGACAGCAACCCTGACAGGCTCTAAACAGGAAGTAGCTGGGTTTGTCTCTTTTGGGGTTCCCTGACACATTTCTGTCATGTGCTCTTTGCATATGTGCATGTGTTGTGAGAATTTGCTTACACATATTGTCAAACGAATGAACACATTTTCTTAGTTTGGTTTTTCTATATGCATATCTTAGCTTACAGTACATTTGAGCTCTCTCTCCACCACCGTAGATTAGGAACATGCACATGCAAACAGTAATAAAGGAATGAAGCTGTTTAGTGTTTGTGCAAACTTCATGTAATGTCAAACATTACACATAAATTACATTTGGGTCACTTGAATTCCATAACATTTGTGCTTGGAAAGTTTGCATTGAAACTTGACATAAAAATATATTTTCTTTTTTCTATGTAGGTTCAGGAGATTCGAGAGGGACTTGAAACTCTTAAGAGAAAGGTTTCCGAATTGGAGAACAAGCAGAAAACAGTGCTAGGAGTTGCACTT
CCAGAGGACAGTAAGTAATTTAGCTTTCACTTGGGTTT/- TTTATTATTCATTTACATAATCTTATGTTGTGTGTGTGTATTAATTAATAATTATGAAGAGAGTAAGTTAAAGGATAGTGAGTGAATGAGTAAATTATATTTTTCTTTGAGCACAGGTATGAAAAAGGAACTGCAGTCACTCAGAGAAGACATCAAAGGGATGGCCAGCCAGATCCAAAAGAAATTAAAAAGTGAGACTGATAAATAAAATTTTATAAATGAAGCTTTTTTTTTGACAATCAAACTTTTCTGCTCAACCTAACAAATGTGAAAAATTAATCACTTCATTTACATCATAGGTCTTGAACCTAAGAAATTGGAAGTTGAAGAAAAATATATCCCAGTGAATGTAAGAATGAGGAGAACTCAGGTCAGTTGCTTTTATATTTCATGTTTTAATAAATAATTAAACTTAAACAGTGTTGTTTTGCCTGAGAATAATCTGATCTTGTATGTCTCCTCATCATTTTTTGAAAGCATGGTGTTTTGTCCCGTGAATT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
stx4ci1016/ci1016Homozygous♀+/- ♂+/-5 figures with image from Perl et al., 2022Fig. 3 with image from Perl et al., 2022
stx4ci1016/ci1016; ci1018Tg/+ComplexFig. 6 with image from Perl et al., 2022
stx4ci1016/ci1016; ci1019Tg/+ComplexFig. 6 with image from Perl et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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