Genomic Feature
cq205
- ID
- ZDB-ALT-220315-1
- Name
- cq205
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yun Li Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 16: 43484996 - 43485003 (GRCz11) (1) Details
- Nucleotide change
- CCTCACAG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted in Exon 8 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TGCCACTCAGTGGTGGAACTAGGTACTGCACTCCTGGTTCAAAACACACGCAAGGGCAGGTTGCCAGATTGACGACACCAACAGGATATTAAGTTGATAATATCAACAGATATTAAGCAGACAGTCTACTAATACTCCAATGTACCATTAAAATAAAGTGTTACCAAAACAGCTTTAAAAATTAAAAACTGCTTTTATTCTAGTTAAAATAAAACAAATGCAACTTTCTCTAGAAGAAAAAATATTTTAGGAAACACTGCAGAAAAAAATTCTTGCTCTGTTAAACATGAATTGTGGATATATTTGAAAAAAGAAAGAAATATTCACAGGACGGTTTATAATTTAGACTCTTTAACTGTACATTTTAAAACATATAGATGGAAACAAGCTTGTGTATAGTGAGTGGTCTTACGTCACAGAATCCCGGATCTTGCTGTCTATGATCTCTTTGTAGACAGCGGCAGACTGAACCTCCTCTAGTGGACACATGATGCCGTACT
CCTCACAG/- CCTTTTTCCAGAACCAGAGGGTCCGTCCGGTGAGGGTCAAACATGATGTTGTTGGGTGTCACCAGCAACACCCCACTAACAACACCCTGTGAAACAAGGCAGAAGTACTGTGTATCAGATACAGCTTGCGTACTTTTATGCTTTTTTTCAAGATGTATTATAATGCTGGGTTCACACTGAAAGCAAAATTAAGCATTTGCACATGTATATTACATGCAAAGTCAATGCACACAAATTTCCAACAGGCAGTGCGAATGATGTGGAACAAACAAACAGAATTCTGTGTTCAAATAATTTGAAAACATTCTGCAAGTAAACTTTAGCGAGTGAGACATTGCTCCACATTTGGTGTAAAACCAGCAGAATTCTCAGGTAGAGATCTGCGCGGGACTAAATTTTTAATCCCGCTCCCGCCAGGTTTTATTCCGAACCCGACCCCACCCGCTTATATTTGTCGTCCCGCTGTCTGACCCGCCTTGTTTTCTACACGTCACGATCGT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| oxr1acq205/cq205 (AB) | Homozygous | ♀+/- ♂+/- | 2 figures from Xu et al., 2020 | 3 figures from Xu et al., 2020 | |
| oxr1acq205/+ (AB) | Heterozygous | ♀+/- ♂+/- | Fig. 3 from Xu et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None
- Xu, H., Mao, X., Nie, Z., Li, Y. (2023) Oxr1a prevents the premature ovarian failure by regulating oxidative stress and mitochondrial function in zebrafish. Free radical biology & medicine. 203:102-113
- Xu, H., Jiang, Y., Li, S., Xie, L., Tao, Y.X., Li, Y. (2020) Zebrafish Oxr1a Knockout Reveals Its Role in Regulating Antioxidant Defenses and Aging. Genes. 11(10):
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