Genomic Feature

cq205

ID
ZDB-ALT-220315-1
Name
cq205
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yun Li Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 43484996 - 43485003 (GRCz11) (1) Details
Nucleotide change
CCTCACAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 8 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGCCACTCAGTGGTGGAACTAGGTACTGCACTCCTGGTTCAAAACACACGCAAGGGCAGGTTGCCAGATTGACGACACCAACAGGATATTAAGTTGATAATATCAACAGATATTAAGCAGACAGTCTACTAATACTCCAATGTACCATTAAAATAAAGTGTTACCAAAACAGCTTTAAAAATTAAAAACTGCTTTTATTCTAGTTAAAATAAAACAAATGCAACTTTCTCTAGAAGAAAAAATATTTTAGGAAACACTGCAGAAAAAAATTCTTGCTCTGTTAAACATGAATTGTGGATATATTTGAAAAAAGAAAGAAATATTCACAGGACGGTTTATAATTTAGACTCTTTAACTGTACATTTTAAAACATATAGATGGAAACAAGCTTGTGTATAGTGAGTGGTCTTACGTCACAGAATCCCGGATCTTGCTGTCTATGATCTCTTTGTAGACAGCGGCAGACTGAACCTCCTCTAGTGGACACATGATGCCGTACT
CCTCACAG/- CCTTTTTCCAGAACCAGAGGGTCCGTCCGGTGAGGGTCAAACATGATGTTGTTGGGTGTCACCAGCAACACCCCACTAACAACACCCTGTGAAACAAGGCAGAAGTACTGTGTATCAGATACAGCTTGCGTACTTTTATGCTTTTTTTCAAGATGTATTATAATGCTGGGTTCACACTGAAAGCAAAATTAAGCATTTGCACATGTATATTACATGCAAAGTCAATGCACACAAATTTCCAACAGGCAGTGCGAATGATGTGGAACAAACAAACAGAATTCTGTGTTCAAATAATTTGAAAACATTCTGCAAGTAAACTTTAGCGAGTGAGACATTGCTCCACATTTGGTGTAAAACCAGCAGAATTCTCAGGTAGAGATCTGCGCGGGACTAAATTTTTAATCCCGCTCCCGCCAGGTTTTATTCCGAACCCGACCCCACCCGCTTATATTTGTCGTCCCGCTGTCTGACCCGCCTTGTTTTCTACACGTCACGATCGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
oxr1acq205/cq205 (AB)Homozygous♀+/- ♂+/-2 figures from Xu et al., 20203 figures from Xu et al., 2020
oxr1acq205/+ (AB)Heterozygous♀+/- ♂+/-Fig. 3 from Xu et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations