Genomic Feature

zf3379

ID
ZDB-ALT-220214-15
Name
zf3379
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with CRISPR
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 43316543 - 43316562 (GRCz11) (1) Details
Nucleotide change
CATCACAGTGAACTTGGTGG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
20 bp deleted in Exon 4 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GACTTCAACTGTATGTATGTATGTACGCATGTATGCATCTATACATGTGTGAAATGGATATATTTATGTATATATGCATTGTTTGTTTGTTTTGTTCCCCCCACAAGTCAATAAAAACTATTTTTAAAAAAGTATAAAAAGTAAATAAAATATTTAAGTATTTTTTTTAATAAAGCTACAAAGATCATGCAGTATATGACTCAAACTTAAAGAATAAAAAATAGTTGAAATTACAGCACTATTAACTCAAGAAATTAAATTCCTTAGGGGTAATGGCATTTTTTTTCAGACATAAGCAATAAAAAGTCATTTATTATTACCTACATCATGAAAAATTTATTTAAAAATAACTTGCCCAACACTAATCCAGAGTGACTCTGGATTACTCTGAACATGTGTGAACAGAAAGAGCACAGATGACTGTACCTGTTCTCTGATGTTAGCTGTGTCCAGCGTGTAGTTCAGGGCTATTTTAGCAGCTTTATATGGTTCCCACGCCT
CATCACAGTGAACTTGGTGG/- CCCATGTATATGCTTATAACCTGAAGATGCAAGGTCGATGTTGTAGTTAAAATATCAAGTGGGTCACATTTTCTGAAAAGACATGATGATTAAAGTCTTCTCACCCAGTTGTCAGGGAAGTATTTGTCCACGATCTCTCTCATCTTGGCCTGTTGTGTGTGCAGGATGGAGGGAGTGAAATATAAGCAGACATAAAGCATAGCGGCCTGAGTCGCCAGAGCTGTGCTGCGGTGCTCCGGCAGAGGATACGCAGAGACCTACAACAGAGCATACATTTGCACAAAGCAGGAATAAACATGAGATATCCAGCTGAATGAGAGGTTTTCAAACTGTTCTTAAAATATAAATATGAGGAAGCATTTTCTGATATAAAGCTGGGTGTAGGAAAACACAAAAGTAATAAATATATTATTATTATTATTATTATTATTATTATTACCACAGTAAATATTATTACATTTATTTTTTATTTTATTTTTTGCATTTTAATCGTCAGCAGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
washc5zf3379/zf3379Homozygous♀+/- ♂+/-2 figures from Bu et al., 2020Fig. 1 from Bu et al., 2020
washc5zf3379/+Heterozygous♀+/- ♂+/-3 figures from Bu et al., 2020Fig. 1 from Bu et al., 2020
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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