Genomic Feature

rr2

ID
ZDB-ALT-220119-2
Name
rr2
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Seko Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 14
Variants
Variant Type
Small Deletion
Variant Location
Chr 14: 46616225 - 46616237 (GRCz11) (1) Details
Nucleotide change
GGACGTCAAGCCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATATATATATATATATATATATATATATATATATATATATATATATACTATAATTTAAATTAGTTCTGTAGCAATATTATTGATTGGCTACAGAACAGAATAAACTTGAATATTAATATCAAGATTTACCAAATAATAAAAACACTGAGGGTGGAGAGAATAGGACAAGACCAGACACACTGAACCCCTCACTTTACACACCTGGAACATCTACCTGCTCGTGATATGGCGAATGCATGCACTGGTGTATAAACACATAATCTGAGTGAAATTAAGAACTGAGGAACAGAAAATCAGATTTGAGAAGTTGCCTCACCTTCAGGAAACGGGTTGGGCTGAACCACAAAGAGGAAAGCGTGCATCATGTTAAATAAAATCCCAATGGCTCCAGGCTCATAATAGGCAACAGTATCGTAAACTCCGGAGGGGACGAAGCCGAAATCCAAAGTTCTCCGCGCTGGAGCAGCAGGAGTGGCGGACAGCCCGTTCTGTAGCTCCCC
GGACGTCAAGCCC/- CAGCACAGAAAAATCAGTGCCGTTTTCCAAAGCATGATTAGTTCTAGTGTTGAAGCAAATCCAGATGATGGAAGTGGAGGAAATTCTGGGTGTTCAGTAAGACACAATCACTGACAAACCGCAGGTCTCAAGTCCTGCTGTCCGGCGAGCGAGTCATGATGATCATGCTCCCCCAGGAGAGCGGCTTCTCCTGCAGGTTCACGGCGGGGCTCGGTGTCTGTCCGCCGGTCAGTCAGTCTGATGCTCCGCTATAAGAAAAAAACACACGACTGAAGAGCCAGTGAGGTGTGTGTCGTTGACTCCAGACTCTCTCTGCGCGTGCACGTCCTCCTCCTGTGCGTTCGTTAACAGTCTCCTGAAGGAGTTCACGCGCGCTGCTCCGCCTGCTGGACACACAGATTACTTCATGAAATCATCTTTAACACACTAAGTTAATGTTGAAGACTTTGATAACTGGCTTATTTAAGAGATGGTATACCCAAAATGTACTCGCCCCTCAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
prom1bsa13905/sa13905; prom1arr2/rr2ComplexFig. 3 with image from Takita et al., 2020
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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