Genomic Feature
tpl148
- ID
- ZDB-ALT-210804-5
- Name
- tpl148
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Balciunas Lab Temple
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 5: 72288653 - 72288659 (GRCz11) (1) Details
- Nucleotide change
- TGTACGA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TCTTATTTTAAATAAAGATATATAAATAACTGTAGCCCACGTGAAAACATATTGCATTTCTTAAATTTTTATTAATACTTAAAATTACTAAAGACTCTGGGCACACACACACGCACACGCCAAGACACTAGTTAAAGTTATCTGTTGAATGTTTATTTTAGTTACTTATATACTAGTGTTTTTAATATAAATAACTAACCTAAAGCTAAATGAAAAGTTTTTGAATATGAAAATGATCGAAATAATTCTAAAAGAGAGGTGTTTATCAGGTTTAGTTTACCATAAAGCACTTGCACACACACACACACACGCACACGCACCATCGAGGCACTAGTTGACGTTACCTGTTGAATGTATGTAGTCTGCGATGACGGGGATTTGCTGACGGCTGCATTCTGTTTGTCTGATTTTCCTTCGTTTTGTAAATCTTTTGGTTCGCTGTCACTGGGAGAGTTTTGGAGCCGAAAGGTGTCTTCACTGTCCGCCATGTCGGAGAGGCC
TGTACGA/- TGTCTACCGTGAGGCCTAAATACAGAAACAAAAAGATTTTACATCAAATATTTCTGCAGTTTAGTTCAGATTGCATCACTTCAAGACGCCCGTATGCATTTGATTACGGTGATATAACTTATCAGTGTGCTCTTGAATCTGATTTAATGAAAACATTCAACAACAACCGAAATTAACTTTATTACAGTACAGCAGTGTTAATTAGAAAAAAGCAAACATTTATCAATAAGAATAAAACTCTGATCCTATTAAACATTTTATAATTTGGAGCTCTCTGCACAAACATTATTCAGGTGGACTCAACTTTGCACCAAACACGCACATTAAAATGCACATCACAAAGAGGTTTCAATGCGGCTTATATTTTCTTAAAACCAGTCTGTGGATAAAATCAAAACACGGGCCTCCATTAAAACTTTATTGTAGTTCAGGAAAACAAATGCACTGGTGAACGATAGCTGGTTTTCTATTAAATAACCAACAGTTGATGATTATGTGTG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| tbx5atpl148/tpl148 + MO4-tbx5a | Complex | Figure 1  from Cunningham et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None