Genomic Feature

yku1

ID
ZDB-ALT-210414-16
Name
yku1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zoidl Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 15
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 2484883 - 2484886 (GRCz11) (1) Details
Nucleotide change
GCGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 4 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGATGACAGCACTTGCGTTTTAACAGCCTTTCATTTTGTTTTACGCTTGAACAAGCAAATTAAAGCTGAAGTCTATTTAACTGATTAAATTTCGATTCAATTATCGATGCTCTACAATGAACCTCACATTGACCTTTTTTTTTTGACCCTCATATTTACAGTAAATTTACATATACTGTAAATTTTTTTTTTTTCTTAAACTCTACTATTTTTTATATGTATATTTTATACTAATGTTAAGCACCTTGGGTCTGAGAGTAACGCAATTTCGATTCTCTGTATGTCTTGTACATGTGGCTGAATTGACAATAAAGCTGACTTTGACTTTCACCGGAAGTTTTATCAGTGGCTGAAACACTGTGCATGTAGCCCATTCCTGTTGCATACTTCTATCACTGATATGCTGTTATATTTGCATGTTTTTCCCCTTTCAGCTCTGTGATAGACCTCACTGAGAGCTATTTTAAATATCCTCTGGTGGAGCAGTACTTGAGGACCAA
GCGC/- TACTCTAAAGGATTACTGATCCGCTACCTTCTTTGCCGCACCATCACTGTCTTGGCCCTCACTCTAGCCTGCATCTACCTTTGCTATTACATCAGCCTCTCCACCACCGATGAGTTTTCGTGTGACATCCGCTCTGGTGTGGTTGTCAATGACTCCTCCGTGCCTCCAGCCCTGCAGTGCAAGCTAGTTGCTGTGGGCATCTTTCAGCTCCTGAGCTACATCAATCTTTCAGTGTATTTGCTGCTGTTGCCATTGTGCATGTTTGCCATGTTGGTTCCATTCAGAAGGACCAAGGGCTTCCTGAAGCCTTTCGAGATGTTGCCCACAATAGGTGTGATGCAGTTTGGGCAGGCGACCTGGGATGATCTTGCTCTGTATCTGCTGTTTCTGGACGAGAACCTCAGTGAGCTGAAGAGCTATAAGTGCCTTAAGGTGTGTTGATGAGGTTTTGTTCCATGGATTCCGGTAAGGAGTCCTCAGATACTTTTTAATGTCTGTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
panx1ayku1/yku1Homozygous♀+/- ♂+/-9 figures with image from 2 publications4 figures with image from 2 publications
panx1ayku1/yku1; panx1byku2/yku2Complex4 figures with image from Whyte-Fagundes et al., 20222 figures with image from Whyte-Fagundes et al., 2022
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations