Genomic Feature

upv3

ID
ZDB-ALT-210401-10
Name
upv3
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Forlino Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 67476383 - 67476389 (GRCz11) (1) Details
Nucleotide change
CTTTTCG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Elongated Polypeptide (1)
Sequences
Flanking Sequence
GGGAGAATTTGATCCCTCATTAGATAAATGTAGGAGCAACTTTCTCTTTCCAGTTTATTAATATTAACCTGCTAGTGGACTGACAAATGGAACTATATTTTGTGTACTGTTTTTAGCGAATTGGAAGCCTTTTAGTATCATTTATTAATATCATTTTGGGCTACAAAACTGTATATTTGTGAAATACATGAGTCAAAATGATGATTTTATTTATGCCAAAAGTCCTTTAACTGCCCTTTTCTTTGCTCATGGCTGATACTCACACAGTCAAATGATGACAATTCTCCGGAATCTCTGCACTTCCTTGATGATCCACTTTGAACCCTTTTTGCTGATGACTGTATTTGACTCTAAAGTGTACATGCATTGTCGTTGACTGCAGCGGAGTAAAATTGTGTTTTCTGCAGGTGCACAAGAAAGAGAAGGCCCGCGTGATCTCGGAGGACGAGAAGAACTTCAAGGCTTTCGCCAGCCTGCGTATGGCCCGCGCCAATGCCCGT
CTTTTCG/- GCATCCGTGCCAAGAGGGCAAAGGAGGCCGCCGAGCAGGACGTCGAGAAGAAGAAATAAACATTTGTATGGAACTGTCAAAAAAAATAAATGTCTTTAAAAAAAAATTCTGCTTTCCTGGAATCTTTATTTTAATCTTAATACCATGGAAATTTGGCTAGTTTGTAGAATATGCACTTATTTTTACTGATATGCCATGTTTTGATTTATTTAATGATGCATTTATTAGTTTTGGAAGCATTAAAGTAACTATTTCGAGAAATAAGTATCTCTTAATGAAGTATCTCTGGATTTGGACTTTGCAAGCAGTGCAGCGGGAAAACCAGCAAAGTTTTTTTTTTTTTTTCCTCCCTCCCCCTTCAGGATTGCAGACATTATTGGTTTTGATTGTCACTGATGAAGTATAAATGGTGTATTTTTTGTTTCTTCTAAATGTTATCTAGAGATGACACGCATACAGAGATGCAAATACAATATTCCCCAGAAGATGGCAGCGTTTAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rpl13upv3/upv3Homozygous♀+/- ♂+/-Fig. 6 with image from Costantini et al., 2020
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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