Genomic Feature

zf2239

ID
ZDB-ALT-210121-23
Name
zf2239
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 6010536 - 6010549 (GRCz11) (1) Details
Nucleotide change
GTCCGGCTTCAGCG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
14 bp deleted in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CGGGCAGAGTTGAAGGACGCACAAGAGGAGCGATTTACTTGATTGACAGTTAAGCTGGCGAATCACAGGCCAATTTGCGCGGACGTCGGACGACGCGGACCAATGAAATTAGCCTAAAAGGGGTCACAACAAACCACCTACAACATTTCTTTTTAAACTCACGTGGAGCGCTCGTTACTCCCAACGGCTTTATAATAAGCGTTTAACAATGATTTGTACAATAAACCTGTACATCATTCCATAGAGCCCATTACCATGCATTTTATAAGTTGTTGTTTGAGGAGAAGTACTGTCTCAATTGCTGTCTCAAGGTCTTTTTCCATTCATAAGCACTTAGCTTTCGGTTACAGTAATAGCTACATCATACATGACTGCTTCTTTCTTTGGCAGGTCTCTTTTAGTGAAAAGGCTGTTTTGTTCTGGCTGGCCTGGGGATGACACTATCTACTCCTTGTCGTCGGGTCAGGGCAAGTGTGGGGTGGCGGTGGTCCGGGTCAGCG
GTCCGGCTTCAGCG/- CTCGCTGTTCGCCGTCTGACCCGAAGCCTCCCTGCGCCTCGAACTGCCAGCCTCCGCAGCATCAGCCACCCGCAGAGCAAAGAGCTGCTGGACCGCGGCCTGGTCCTATGGTTTCCAGGTGATTTAGGCTCCTTAACTCAATTATATCATCAAGTTAAATGTAGAACAAGTGTATTTTTGTTAAATATCATTGCATAAATGTCATTCATTTGCCCCTTTAACAATAAAATGTTAAAAAAAATAATTGTTTCCCATAATTCTAAATCTGCATTTTCAGAAGCCAATGCTCCAGTCTTTTAAATATGCAGCACCTTTTGCAACTTCCAAACTAGGTTGCAGTTTAAAGAGTTGATTTCACTACATGCTTTTAAAAAGATTTTAAATGATTTGGAGTTTGAAACATTGGCCTGTAAATGTGCAGAATAGTTTTTATCTTTCATTGTATGTGTGTTTTGATGGATAATTGTTACTTGTTATTTGTTTTTGTTTGTTAAACCTAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gtpbp3zf2239/zf2239 (AB)Homozygous♀+/- ♂+/-8 figures with image from Chen et al., 20193 figures from Chen et al., 2019
gtpbp3zf2239/zf2239; twu34TgComplexFig. 8 from Chen et al., 2019
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.