Genomic Feature

ouc2020

ID
ZDB-ALT-201007-5
Name
ouc2020
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Chengtian Zhao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 2
Variants
Variant Type
Insertion
Variant Location
Chr 2: 31686154 - 31686155 (GRCz11) (1) Details
Nucleotide change
-/T
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TAAGCACATCTCATTTGTACATATAAACAGATTTGCAAAATTAAATTTGTATATCGTTTAGGTGCTTTATTTAGTACATTTTAGAGGAAAGTAACAGGTGTTTTAGGCTGAGTAAAATTTTCTCCAATGTTTTTACATGTTGCGCCTCTGCTGCCTCAAGCGTCAGGTAACAAACACCTGCTGTGAGAGAAAAATGGGTTTCTGTACAAACCCCCCTGACACAAGACACGACATTTCGATCTTTCATTTAACACTTTTAATCAACCTCGAACCAGAGCTTTAATGTTTCTGCATAACTCTATTACTAAACGCCTCAGTTTACGGCGAAAGTTCACTCAGGTGAGAGAGTTTCTTTGTGTACGTCCTGACTGAACTCCGCAGCCTGTCGACTTTCATTCATTCTCGTCACTCATTCATTCGGCTCGTAAATGTGTTTTAACCCACCACTTTGAGGTCGAGCACCCCATCTTTGGCCTCCTGGAGCAGGGTGACGAACTTGAC
-/T TGTGAGGAGACCCAAACTCTTCTCGTGGCGACTGGACCCGTTCGGTGTCGAGTGAGGGAAACTTGCGCTGTTCGACTCGGCCATAACATCCAAACGCCCGGTGTTTACTGAGGTGACACAAAAAATGGCCTTTGTCCCGTGTGGAGGTGGACCTCAGTTTGGATGGCGGCGGTGAGGGGGAGCAGAATTCATCTCCAACACTTCTTTACCTCAGGCTACACTTCTACTGCTGATGGCTCGAGGCTTTTTAAATCAAAGGAAATGACGTTGGATTACAGTTACTATGACAACGTATTCGCTTGAGCGTTTGGCCAGAGCAGTTTTTTTTTATCAGACACGAAAACCCAAATAAGATCCACAAGTCCTAAATATACCGCTAACGTTCATTCAATTAAGATGTTTTCTAATAACGTTATAAATTGATCAAAAATATTACCTGCAATTTCTTGAAGTCACATTATTACATTTTTTTCCTGCGGATATTATTTCTTTCCATTTTTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
e2f5ouc2020/ouc2020Homozygous♀+/- ♂+/-3 figures with image from Xie et al., 2020Fig 3 with image from Xie et al., 2020
e2f5ouc2020/ouc2020; ouc2017TgComplexFig 3 with image from Xie et al., 2020
e2f5ouc2020/ouc2020; ouc2018TgComplex2 figures with image from Xie et al., 2020
tp53zdf1/zdf1; e2f5ouc2020/ouc2020ComplexFig 2 with image from Xie et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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