Genomic Feature

hza56

ID
ZDB-ALT-200810-3
Name
hza56
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Jie Mei Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 12
Variants
Variant Type
Small Deletion
Variant Location
Chr 12: 14634175 - 14634182 (GRCz11) (1) Details
Nucleotide change
ATGGCGTG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTTGATTTGATGCATATGAACACTTTGTTAAAACAATAAGCAGACCAACTCCACATGAATAAAGTAAAAGATTATTGTCACTTATTTTAAGTTCTTTTATCTTATGCTAGCAATTGCTAGTGCAAACAACTTCTGAAGCAACAGCAATAAATCACCTGCAACATTTAGTTGATTTAGTGAGCGAAGATTAGATATGACCTATCAGCTTGTGCACCTAATAGTTTTATGACAGAACTTTGTAGTTATAGTAAAATTTCAGACTAACAGCTAGTAGCTTTAAAGCTACAACCATTAACCTAAATGATCTATTATTCTAGCAGCTCCCTAACAACCACCTCCAAAAGTGTATAGCATCACTTTACACCATCACCAGTATGCCATCAACCTCCTAGTTTTGTAAGATATTGTAAGAAACATAATGTTGAATTTTGTTAATCTAATTTAAATTGTCTAATAATTCTTTATGTAATTTCAGGAGACCTTTTTGGAGAACAAACAAG
ATGGCGTG/- GCTCGAAAATTTATACCACCTGCAAGGTATGGTTATGTTTATTTAACATCTTAATGTGTTCTGGTTAGAACTGCATTGTAGGCAATTAAAATATTACAATCTTTAATGAAACCAATGGTTTATAACAATTATGAAATACATTGCAAGTGTGAGTTATTCGCAGTGCTTCACTTTTTACACATTTCATGATGTAAACGCCTTATTTCAAAAATGGATTTATTGTTAAAATTGTTAGCCCCTTCTACAGAAGAAATCATTGTTATACAATAAGTTACCCCAACCTGGTTAACCTAATTAACCTAGTTAAGCCTTAAAATGTCACTTTAAGCTGTAAAGACGTGTCTGTCATTATGGCAAAAAAAAAATTATCATTTACTAGAAATGAGTTATTAAAATTATTATGTTTAGAAATGTGTTGAGAAAGTCTCTATGTATATATGAATGTATATATATATATGTATGTATGTATATATGTATGTATGTATATATGTATGTATGTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
becn1hza56/hza56 (AB)Homozygous♀+/- ♂+/-text only from Mawed et al., 2020
becn1hza56/+ (AB)Heterozygous♀+/- ♂+/-3 figures with image from Mawed et al., 20203 figures with image from Mawed et al., 2020
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.