Genomic Feature

zf3088

ID
ZDB-ALT-200709-8
Name
zf3088
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Lingfei Luo Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 62723535 - 62723541 (GRCz11) (1) Details
Nucleotide change
AAAGGCA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAAGCGCGTGCCTGCCTTGACCCGCTGACCTTCTGAAGACCCGGTCAAGCCATACTTCCAGAGGGTCACGCAAAGCGAACAGGTGCATTAAGCCAGACAGACGGACCGATGTCCTGTCTGGAATCTGTTGAAGATTCTTCTATATATAGCTGTCACCCGGGGTCATGGGCAAAACACACCTAAAACACACACCTGGACATGATGCAGTCCGAGAGTCAGCAGAGCGTCCCCACAGCCGACGGCTGTTTCCTGATGTGGCGGGATTACATGGACCTGCGCCGGACTCTGTCGCAGCTGCTGCTGGAGCATCGCGATGAGGAGCGGGCGGCTGTGAGTGTGGTGCCCGCGGAGGGTTTCATCAGGACCGGCTCCTCCAGCAGCGTCTCCGGCAGCTCCTGCACACTCTCCTCCTCCAGCCAGGACCTGCGGAGCCCGCGTGACTCCTGTGGCTTCTGCAGGCAAAACGGAGAGACTGCGCAGATTTACCGGAGCCACAGACT
AAAGGCA/- AGGGACGGACGCGTTCTGTGTCCGATACTGAGGAGCTACGTGTGTCCGTTATGCTCGGCCACTGGGGACCGCGCGCACACCCGCTACTACTGTCCGCGGAGAAACATCACAAAGAAGAACAGTAGCTTCTAAATCAACCAATGCTGAATCTTTTTATAAAAAATTGAAAACAAACAAAAAAATAGACTGTAAATTTGCGTTTGTACTCTGAGAAACGTGTTGCCAGATCAGCAGCCTTTGAATCAATGGACTTTTGCACTTTCATTCATGTTTTATTTTATTATTATTTTAACCTGCATTTGTCTGTCTGCTCAGAAAGTTGTTGCCAGATCTGTTGCTTCTGAATCGATGTTTTTTTTTCCACTTTCATTCATGTTTTATTTTATTATTATTTTTTAAATCTGCCTTAAACTCTCCGCCAAGAAACGTGTTGCCAGATCTGTAACTTCTGAATCGACAGACTTTTTTGTCACTTTTATTCATGTTTTTGTCGTCTTGTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nanos2zf3088/zf3088HomozygousUnknown3 figures with image from Cao et al., 2019Fig. 1 with image from Cao et al., 2019
nanos2zf3088/zf3088; cq41Tg; zf3086TgComplexFig. 4 with image from Cao et al., 2019
nanos2zf3088/zf3088; zf3086TgComplex
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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