Genomic Feature
zf3075
Notes
| Comment | Citation |
|---|---|
| Mutant has several transcript variants. Two with different cryptic splice ... | Petrachkova et al., 2019 |
Variants
- Variant Type
- Delins
- Variant Location
- Chr 5: 54714240 - 54714241 (GRCz11) (1) Details
- Nucleotide change
- CT/ATCC
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp inserted / 2 bp deleted (1)
- Transcript Consequence
- Cryptic Acceptor Splice Site, Inframe Deletion, Intron Gain, Frameshift, Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
TGATGGTTTAAAAAAAAAAAAAAAAAAAAACCTGCCCCTTGAATAAAACCTAGTCCACCGTCATACAGTAATAACAACTGCGGCAGAAATCATGCAACAGTAATCTTCAGATGCTTTGTACGTGTACCCTTCTAAACTTTATCAATTTTAAAAGTAACAGATCCACGGTTTACCTTAACGCCATGTTGAACCTTAGGAGAATCCTTCTTGGGCTGTTGAACCACAGGTGCCTTCTCAACCACAACCTCGGCGGCGGGTGCAACCTTCACCTCCTGTTACAAGTTTGGCGATTTATTTTTAAATTGAAAACTTGTCAATATTAAAAGGGGATAAATGAAGAAATTACTTTAAGCTCTTACCTTCTTCTTCAAAGCCTGTCGTGTTTGCGGATTGTTGCCAATCTCCCCCAGCGCGGCCCTTGGTCTGAGTCCGGGCTTGTTCGCTACAACTGCTTTTCCGGGCAGAGCGTTCTGATTCTCGCTGCTGGCCAGGCGAGTGTT
CT/ATCC ACTCGGTAGGGTGGATAAAATAATCAGTTTTACAGAAATGGTAAGTGGTGGCTTAAACAGTTAGGTTAGAGAGCTTTCAACTAAAATCTATAGACATCATGCAATATAGTTCATCGTAAACTTAAAGCATGCGATTAATAGTCTTATAAACAGCACATTAAAAAAAAGTTAAAATGCAACAGTGACAAATAAAACACGATCTCTAAAATGAAACTTTCTACAAAATGCTTTCGCAAATTATAGGAACTGAAGAACGCGCTAACACAGCACCATGTTAGACATCGATAATGGAACATCTCTGGCATTCTCCTTCAGATGAATAATGAACAAAGGCTGCTCTGTACAACGCAACATACGCAGACTTAAAACTGAAATGCTAATAAAACAACTTACCCTTGTGACACGGAGAGCCATTATTTCTCGTGGTTTATTGCTGTGACTCGATGAACAAACTGGTAAAATCTACTCAAGCGAGCTCAATATAGCACTATTTCTCTACA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None