Genomic Feature

rmc105

ID
ZDB-ALT-200505-1
Name
rmc105
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one MNV (1)
Protocol
embryos treated with
Lab of Origin
Molecular Therapies for Inherited Eye Disorders
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
MNV
Variant Location
Chr 7: 38749087 - 38749091 (GRCz11) (1) Details
Nucleotide change
GATCC/AATCT
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp inserted / 5 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAAGTGCACTCATCAGCCAAACGCATCTACAAACGACACGACCCAAAGAACAAGCCAGATCTAAGCAGCAAGAAAAAGCTCTTGAATAGCAAAGACGACTTAATGCAGCCGTTGACAGTTAAAGAAGAATCCAGCACAAAGCAAAACGGGCAGGATTTCCCTCCCTTCAATATCCGAGAGAGGAAGTACAAATGCGAGGAGTGTGATAAAAGCTTCTTTCAACTGTGCCATCTGAAGAAACACAAATACACTCATCAAAATCAGAAGCCATACACGTGCACAGAGTGTGGCAAGTCCTACAGCTCACATGAGAGCTTCCAAGCCCACCTGCTAATGCATCGTGGCCAGAGGCCCTTTAAGTGCGAGCAATGTGACAAAAGCTATGGCTTGAAACGGGACCTCAAGGAGCACCAGGTTCTCCACTCAGGAGAGAAACCGTTTGTCTGTGACATCTGTGGAAAAGCATTCGCTCGTCGGCCCTCGCTACGAGTCCACCGAGA
GATCC/AATCT ATCGGACAAAAGAGCCAGACTACCAGGCTTTAAAGGTCAAGTGTCCAGAGTGCGACAAAGAGCTGGCCAATTCGGGTTCTTTGAGGAACCACATGCGTCTGCACACCGGAGAGCGACCGCACATCTGCCCGCACTGTAATAAGTGTTTTCGCCAACGTGGGAATCTGCAAGGACACATGCGCATCCACACAGGAGAAAAACCTTACAGGTGTGACCACTGCGACCTGAGATTTTCTCAAGTACCCGAACTGCGTCGGCATCTGATTTCACACACGGGTGAGGTGTATCTCTGTCCTGTCTGTGGTAAAGCTTTACGGGACCCTCACACGCTTCGCGCTCATGAACGGCTCCATACGGGAGACAGACCTTACAAATGTGAGCAATGCGGGAAAGGGTACACGATGGCAACCAAGCTACGACGCCACCTAAAGTCCCACCTGGAGGAGAAGCAACACGTTTGCCAGGTGTGCGGAGCAAAATACTCAATGATGCAGAGTCTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
znf408rmc105/rmc105 (TL)Homozygous♀+/- ♂+/-2 figures with image from Karjosukarso et al., 2020
znf408rmc105/+ (TL)HeterozygousUnknown2 figures with image from Karjosukarso et al., 2020
znf408rmc105/rmc105; la116Tg (TL)ComplexFig. 4 with image from Karjosukarso et al., 2020
znf408rmc105/+; la116Tg (TL)ComplexFig. 4 with image from Karjosukarso et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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