Genomic Feature
pd1169
- ID
- ZDB-ALT-200325-5
- Name
- pd1169
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Bagnat Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 24: 32142081 - 32142087 (GRCz11) (1) Details
- Nucleotide change
- ACACCTG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted in Exon 5 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GAATGTAGTACAAGTATGCGCATTAAGACACAACAACTGAAGTCACTGGGCGTAGTGATATGGAACTGTAATGTGGTCAAAACCTGCCTGGAACAACTTCTACTGTGTGTTTATCTACATTAGAATTTTCACCAGCCAATTAGAATCAAGCACTCAACAACCCTGTAGTATAAATGGTTGATAGATTGAGAAGGGAGGGAGAGTGAAATGTGAATTAATAAAATCACCTCATTGGGATTGACTCTGTCAGAATCAATGCAGAGGCCGTGAACACACAGATCTTGACTTCCACCAGCACAGTCATCATAGCGAGATGTACAGTGTGGACCGTACCATTCTGGAGTACAGGTACACCTGACAAACACCAGTAAAGTATACATTTAAAGGCTTATATGTCACTAAAACTCAGATCAGAAGAAAAATAATGCAGGATTACGTGTAGGATCCAGGAGTGTTGTTACATGTGGCTCCATTCTGACATCCGAGTGGAGTTCCTGCCA
ACACCTG/- ACACTCATTCACATCCACAGCACATGTAGGACCCTTCAGAAAGACCAAGAAATTTAGTTCAGGTCAAAATGTATGAACTGAAGCACATAGTACAGAGAAAACAGCAGCAGGACAAACTTTTTTGATCAAGTGAAAACTGGGGTCTCAAGGCACTGCAGGTGAACAGAGTTAAAAAATACTAATAGTTTATCATCATTTCCCAGTTGTTTGACCACATTAAGAATTGCAAACATTTTGTTTTGTATTTATTTTTGTTAACTGTATGTTTTGAATGCACAAATTAGGTATTGTTAAAGATTTTTTCTGCACAAAAATCTAAACATTGAATGAAGTCAAAATTGTTTTTGTTTTTTTGACACATTTGATGCAACATTTTTAAAGAGAGAATTTTGGGAATCTCTTTTATCACTATAATATAATTACTTTATTACAAATGATCATAAATCAGAAAATATTGAAAACAGCTGGGATAAAAAAATAAAATATATATATATATATAT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| cubnpd1169/pd1169 | Homozygous | ♀+/- ♂+/- | 2 figures  from Park et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None