Genomic Feature
uy21
- ID
- ZDB-ALT-200323-3
- Name
- uy21
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Kawahara Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 2: 33327302 - 33327356 (GRCz11) (1) Details
- Nucleotide change
- CGCCCGCCTATTCCCTCCCGGAATCACCGGAGAGCTGCAGCACCGTGATGACAG/TGCACCGCTCAGCATTCCTGCAGCACCGTGTATGA
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 35 bp inserted / 55 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ACGTCAACAAACTTAAGTTCGTTATACTGTGTTATCAGCTAATATATGTTTACACTTCAAGAAAGTAAAAGCTTAAAGTTTTTAGTGAAACGGGCCTAGATAAAGTTGTTTGTGGTAGGTTGTGTTGTACATTTCAAATAGAACATTTATTTTTAGAAAGTTGACACATTGGTAGTCGTACACAGGCAACTGCTAAATGTTTATTGTAGATTTTAAAACTGTCCTAATAATTAGGACTAGAATAAAAATTACTTCAACGTCTGCAGAAATAAGCAGTCTAAGTCGAAAGTTGTGTTTTCTTTTTCTCCAGGACTGGAAAGTTGATATAGCAAAAACTAACCCAAGGGCTGGAGACGTGAGACCCCTTATTGAGGTGGAGTTCAGCATTGTCGAATCTCCACCTTTGGCCAAAGACGAGGATGATCTTTCCAAGTTTTTGGATCTAGAGTTTATTCTGTCCAACACGGTCACGTCTGACAACGACAACACCTCAGCACCGC
CGCCCGCCTATTCCCTCCCGGAATCACCGGAGAGCTGCAGCACCGTGATGACAG/TGCACCGCTCAGCATTCCTGCAGCACCGTGTATGA CGATGGATGTCACCCGACCCCTAACGCCTACTGTGGCACCAACTTCAACTCACGTCCAGGACACAGTCTGGTAGCCGAACTGTTTACCCCGGACATGAATTATCAGGGCGAATATAATCTGAAAGGACATTTAGACAGATTGGAGTACACTGAACTGAGAGCTCTAAACACACGAAACCAACAACACCTGACCAACTCGAATAACGCGGGATATAAAATTAAAACCGAGAACCAAGAGCAATCCTGTATGATGGTAAACGACTACATGGGTCATTATTACGCACAAGAACCCCAGCGCGTAATGCAGCATCAAACGTACGGGCATCACGTGCAGCAAGATGTGCCTCGGGACATTTTAGGAAGGAAAGACTGCATCCTGACAGAGATGAACACTCAGCATCACATTGACATCTCGCATCAACAGCAGTTTATAAACAATGCGCATTTTCCACCTCAGTACGCCCAGCATCAACAGTACCACGGACATTTTAATATGTTTA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| klf17uy21/uy21 | Homozygous | ♀+/- ♂+/- | 3 figures  from 2 publications | ||
| klf17uy21/+ | Heterozygous | Unknown | Figure 7 from Suzuki et al., 2019 | ||
| klf17uy21/+; klf17uy22/+ | Complex | 2 figures from Suzuki et al., 2019 | 2 figures from Suzuki et al., 2019 | ||
| klf17uy21/uy21; ko02Tg | Complex | Figure 2 from Suzuki et al., 2023 | Figure 2 from Suzuki et al., 2023 | ||
| klf1uy19/uy19; klf17uy21/uy21 | Complex | 2 figures from Suzuki et al., 2023 | 2 figures from Suzuki et al., 2023 | ||
| klf1uy19/uy19; klf17uy21/uy21; ko02Tg | Complex | Figure 2 from Suzuki et al., 2023 | Figure 2 from Suzuki et al., 2023 | ||
| klf1uy19/uy19; klf17uy21/uy21; ko05Tg | Complex | Figure 3 from Suzuki et al., 2023 | Figure 3 from Suzuki et al., 2023 |
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Supplemental Information
- Genotyping protocol
- None
- Suzuki, H., Ogawa, T., Fujita, S., Sone, R., Kawahara, A. (2023) Cooperative contributions of the klf1 and klf17 genes in zebrafish primitive erythropoiesis. Scientific Reports. 13:1227912279
- Suzuki, H., Ishizaka, T., Yanagi, K., Sone, R., Sunaga, Y., Ohga, R., Kawahara, A. (2019) Characterization of biklf/klf17-deficient zebrafish in posterior lateral line neuromast and hatching gland development. Scientific Reports. 9:13680
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