Genomic Feature

zf2223

ID
ZDB-ALT-200311-12
Name
zf2223
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with TALEN
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 3
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 45767977 - 45768005 (GRCz11) (1) Details
Nucleotide change
TGATTCAGATTTATGTGAATGGCACCGAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
29 bp deleted in Exon 1 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TGATGGTAATACTGTATTTTAATATTGTGTTATTTCAGATATTATTTCCATTCTCTTTCTCTTATAACAGGTGTTGCAGCTGTGCTGTTATTGGTAAGACTAAAAAATCATGCTCATGGACTGGAGGAAACAAGACTGCGCTGGACTAAACACGTGTGAAAAACAAAGCGTGCAAAAGAAAAAAAAGAAGCAAGATCCCTAAGGACTGACTCTAGGTGTTAGTGCCATGGATCACACAAGCCCAGGCAGCCTCCATAGCTGAGAGACTGCCATGAAAATGGAGGTCTTCAACCCAGGCTCCATCTCTAGAGGCAAATCTTCATGGATGGCATCTACCAAACATTAAGCATACATCAAGTTGCCGTCACAATGCGAATGCATCCTAAATGAAGGACCCTCATTACAAAGTGAACTGGGCAGTGACACAGATGAAGTATGTAGCACCTTTTACAGCATCTAAAACAGAGACCTGGTCAGCATGGAGGAGCAGACTACCAATG
TGATTCAGATTTATGTGAATGGCACCGAG/- CAGTTCAATGCTTCGTTTGACTTCAACATAACTGATGTGAAAGAAAGCACAGACACCTATGAGTTTTACATCATCGGCCTGTTTCTCTCATGCCTGTACACCATTTTCCTTTTCCCAATTGGTTTCATTGGGAACATCCTCATTTTGGTGGTCAACCTCAACCACAGGGAGAGGATGACCATCCCAGATCTGTACTTTGTCAACCTGGCTGTGGCAGATCTTATTCTGGTGGCAGACTCTCTCATTGAAGTCTTCAATCTCAACGAGAAGTACTACGACTATGCTGTACTGTGTACCTTCATGTCGCTTTTTCTCCAGGTAAACATGTATAGCAGCATCTTCTTCCTGACATGGATGAGTTTCGACCGCTACGTTGCTCTCACCAGCTCTATGAGCAGCAGTCCATTGCGAACCATGCAGCATGCCAAACTCAGTTGCAGCCTCATCTGGATGGCCTCCATCCTGGCAACTCTGCTTCCTTTCACAATTGTGCAGACGCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gper1zf2223/zf2223Homozygous♀+/- ♂+/-3 figures from Chaturantabut et al., 20192 figures from Chaturantabut et al., 2019
gper1zf2223/zf2223; as3TgComplex2 figures from Chaturantabut et al., 2019Fig. 2 from Chaturantabut et al., 2019
gper1zf2223/zf2223; s891TgComplexFig. 5 from Chaturantabut et al., 2019
gper1zf2223/zf2223; mtorxu015Gt/xu015GtComplexFig. 4 from Chaturantabut et al., 2019Fig. 4 from Chaturantabut et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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