Genomic Feature

zf3058

ID
ZDB-ALT-200303-7
Name
zf3058
Synonyms
  • 43-bp deletion/2-bp insertion (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with CRISPR
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Delins
Variant Location
Chr 5: 27406774 - 27406815 (GRCz12tu) (1) Details
Nucleotide Change
GCGCTGCTGGCACTGGCTGCTGGAAAACCCTGTGGTAAGTTTTG/AC
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted / 41 bp deleted in Exon 2 (1)
Transcript Consequence
Exon Loss of Exon 2 (1)
Protein Consequence
None
Sequences
Flanking Sequence
CTGGAACTTGTAGTCCGCCGTTTGTAGTTCTTTAACCGGAAGTGAGCTATAGTAAACAAACACACGTTTAGAAGAGAGATAGGAATATTTTATTGAAATACAAATGAAAaggcaaaaaaatgaaaacagtttGGAGCAAGAAAGGTAATAGAAGATAATTTAGAGCACAGTTTGACGATATGTTGCAAAACTTTATAGTGTCTGTAAATGAGTAACTGTGGAGAAACTCCGCCTCCTGTCACGGTCATAGTATTTCACTGAAAAAGTAAATTCATCTTAACTGGATTCAACAGGATACCCAACTCAGAGATAAAATGGTAAGAAGGACATTCAATAAACATTGACGTTCTGTTTGTTATTATGGTACAGAATGCTTATTCACAAAActattatttatcaaattaaataagaATCTTGGTAATTATGGAGCACTTAAAAGCAAATTTCACATGTTGTCTGTATTTATTTGTCAATGTCAGATTACTCTCCTCATTGTGAGT
GCGCTGCTGGCACTGGCTGCTGGAAAACCCTGTGGTAAGTTTTG/AC GCAACAGTTATACAACAAAtcatttgcatttcattttaCTTCTGTTAACTTGTATTTAGAAGGAATGtatttgtatttactttttttaattattccttatttattttctattttttttttcaaattaatgtTGACTTGTAATAGTTGCATAATAGGGCAATAATAGAAATCACATCATTGCACAATATTGTTTTTAGGAAAGGTACCATAGTACAAATTATGGCCAAAGACGGTAATAGCCTTTTTCAGCAGACATAATCAGACATAATCGTTCAAGTGTTGGCATCAAGTTAAATTTACAACAAAATTTTAGAAAAAGCAAATGAAATGCAAGTAAACTAAAGAGTCGAATGTTTacagaagacttttttttttttttaataaaatgttagaCTAAGGGTGAAGTGATATTGTTCATTACATATTCatacaaaaagaacaaaaacaacatacttattctgaagttcacttattaaaataaataaaataatgatttttta
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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